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Align your sequence(s)

FAD binding domain

class : alpha plus beta number of structures : 4 average size : 245 average PID : 18 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1i19 rasmol 57 A 273 A cholesterol oxidase Brevibacterium sterolicum 1.70 18.2
1f0x rasmol 9 A 273 A D-lactate dehydrogenase Escherichia coli 1.90 20.9
1dii rasmol 7 A 242 A P-cresol methylhydroxylase Pseudomonas putida 2.50 17.2
1vao rasmol 6 A 273 A vanillyl-alcohol oxidase Penicillium simplicissimum 2.5 22
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : FAD_binding_4  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1i19a  (  57 )                vaplptPpnfpn-dIa---lfqq-----------aYqN
1f0xa  (   9 )                   nkaflneLarlVgsshlltdpakT-----aryrkG
1diia  (   7 )        avlPkgVtqgefnkAVqkFralLgddnVlvesdql-----vpynkI
1vaoa  (   6 )    efrPltlPpkLslsdFneFIqdIiriVgsenVeVisvdgsymkpthtHdp
                                  aaaaaaaaaaa    bb                 

                           60        70        80        90        100 
1i19a  (  80 )    wsk----eimldaTwVCsPktpqdVVrLanwAhehdYkirprgamhgw-t
1f0xa  (  39 )    frsgq---gd--AlAVVfPgsLleLwrVLkACvtadkiilmQaantgl-t
1diia  (  48 )    mmpvenaaha--PSAAVtAttveqVqgVvkICnehkIpiwtisTgrnfgy
1vaoa  (  61 )    hhvmdqdyfl--ASAiVAPrnVaDVqsIvglankfsFplwpisigrnsgy
                                bbb    aaaaaaaaaaaaa    bbbb        

                           110       120       130       140       150 
1i19a  ( 125 )    pltVek-ganvekvILAdTmthLngi-tVntggpvatVtAgAGAsIeaIv
1f0xa  (  83 )    egsTPngndydrdVVIISTlr-Ldkl-hvLg--kGeqVLAYPGTtLysLe
1diia  (  96 )    gsAAPvq----rGqVILdLkk-MnkIikIdp--emcyAlVePGVtFgqMy
1vaoa  ( 109 )    gGAAPrv----sGSVVLdMGknMnrvleVnv--egayCVVEPGVtYhdLh
                                bbbb       b bbb      bbbb     aaaaa

                           160       170       180       190       200 
1i19a  ( 173 )    teLqkh----dlgWaNlPa-pgv-lSIggALavnahgaalpavgqttlpG
1f0xa  ( 129 )    kaLkpl----grePHsvigsscigaSVIggIcnNsGgslv----------
1diia  ( 139 )    dyIqennl--pVmL-sfsapsai-aGPVgnTmdrgvGyt-----------
1vaoa  ( 153 )    nyLeannlrdkLwl-dvpd-lgg-gSVLgnAvergvGyt-----------
                  aaaa       bb             aaaaaa                  

                           210       220       230       240       250 
1i19a  ( 217 )    htygsLsnLVteLtAVvwngttyaletYqrndp-----------------
1f0xa  ( 165 )    -qrGPAy--TeMSLFArinedgkLtLvnhLgI--dLgetpeqiLskLddd
1diia  ( 174 )    -pygehfmmQCGMEVVla----ngdvyrTGmGgvp---------------
1vaoa  ( 189 )    -pygdhwmmHSGMEVVla----ngellrTgmGalpdpkrpetmglkpEdq
                           bbbbbbb         bbb                      

                           260       270       280       290       300 
1i19a  ( 250 )    ---------------------------------------rItplltnlgr
1f0xa  ( 210 )    rIkdddVrhdgrhAhDydYvhrvrdieadtparynadpdrlfeSSGcagk
1diia  ( 204 )    -gsntwQifkwGy-----------------------gptldgmFTqa-ny
1vaoa  ( 234 )    pwSkiAHlfpyGf-----------------------gpyiDglFSqs-nm
                                                                    

                           310  
1i19a  ( 261 )    cfLTsVtMqAGpn 
1f0xa  ( 260 )    laVFAVRLdTfeae
1diia  ( 229 )    giCTkMGfwLmpkp
1vaoa  ( 260 )    givTKIGiwLmpnp
                   bbbbbbbb bb  


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