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Align your sequence(s)

Metallo-beta-lactamase superfamily

class : alpha plus beta number of structures : 6 average size : 242 average PID : 21 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1sml rasmol 2 A 267 A penicillinase Xanthomonas maltophilia 1.70 18.00
1k07 rasmol 36 A 311 A Fez-1 beta-lactamase residues 20-282 Fluoribacter gormanii 1.65 17.40
3bc2 rasmol 8 - 227 - metallo beta-lactamase II Bacillus cereus 1.70 22.70
1jjt rasmol 3 A 222 A imp-1 metallo beta-lactamase metallo-beta-lactamase Pseudomonas aeruginosa 1.80 19.90
1znb rasmol 20 A 249 A metallo-beta-lactamase Bacteroides fragilis 1.85 16.70
1qh5 rasmol 1 A 260 A hydroxyacylglutathione hydrolase Homo sapiens 1.45 20.40
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : lactamase_B  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1smla  (   2 )    evplpqlraytvdaswlqpmaplqIAdhTwQIGTe---------dLTALL
1k07a  (  36 )               yp--mPnpfppfrIAgnLyYVGTd---------dLASYL
3bc2   (   8 )            viknetg---tIsIsqlnknVwvHtElga------vpSNGLV
1jjta  (   3 )            slp-------dLkiekldegVyvHTSfeevngwgvVpKHGLV
1znba  (  20 )            ksvkisd---dIsItqLsdkVyTYvSlaeie--gmvpSNGMI
1qh5a  (   1 )                              MkVevlpAlt--------dNYMYL
                                        bb    bbb                 bb

                           60        70        80        90        100 
1smla  (  43 )    VqTp--dgAVLLDGGM-pqMAshLldnMka-rgVtprdLrlILLSHAHAD
1k07a  (  73 )    IvTp--rgNILINSDl-eaNVpmIkasIkk-lgfkFsdTkILLISHAhfD
3bc2   (  46 )    LnTs--kGLVLVDSSwddklTkeLIemVekkfqkr---VtDVIITHAhad
1jjta  (  38 )    vlvn--aeAyLIDTPFtakdTekLvtwFver-gyk---IkGSISSHfhsD
1znba  (  59 )    Vinn--hqAALLDTPindaQTetLvnwVadslhAk---VttFIPNHwhgd
1qh5a  (  17 )    VIDdetkeAAIVDPV----qpqkVVdaark-hgVk---LtTVLTTHhhwd
                  bbb    bbbbb        aaaaaaaaaa        bbbbb     aa

                           110       120       130       140       150 
1smla  (  89 )    HAGPVaeLkrrT-gAkVAANaeSavlLarGGsdDlhfg--dgitYppanA
1k07a  ( 121 )    HAaGSelIkqqT-kAkYMVMdeDvsvIlsGgksdFhyandsstyftqstV
3bc2   (  91 )    RIgGIkTLker--gIkAhStalTaelAkkng---------------yeeP
1jjta  (  82 )    STgGIewLnsr--sipTyAselTnelLkkdg---------------kvqA
1znba  ( 104 )    CIgGLgyLqkk--gVqSyANqmTIdlAkekg---------------lpvP
1qh5a  (  59 )    HAgGNekLvklesgLkVyGGdd-----------------------rIgal
                  aa  aaaaaa     bbbb    aaaaa                      

                           160       170       180       190       200 
1smla  ( 136 )    driVm-dgevItVggivFtAhfM-aGHTpGSTAWTWtDtrngkpvrIAYA
1k07a  ( 171 )    dkvLh-dgerVelggtvLtAhlT-PGHTrGCTTWTMkLkdhgkqyqAVII
3bc2   ( 124 )    lgdLq-tvtnlkFgnMkVeTfyPgkGhTeDNIVVwLpq------ynILVG
1jjta  ( 115 )    tnsfsgvnywLvkn--kIEVFyPgpGHTpDNvVVwLpe------rkILFG
1znba  ( 137 )    ehGft-dsltvsLdgMpLqCyylggGhAtDNIVVwLpt------enILFG
1qh5a  (  86 )    thkit-hlstlqVgsLnVkCLaT-pCHTsgHICYfVskpg-gseppAVFT
                   bb      bbbb  bbbbbb           bbbb          bbbb

                           210       220       230       240       250 
1smla  ( 184 )    DsLsAp-gY-qLqgnpryphLiedYrrSFatVraL--pÇdvLLTPhPgaS
1k07a  ( 220 )    GSIgvnpgY-kLvdnitYpkIaedYkhSikvLesm--rÇdIFLGShAgmF
3bc2   ( 167 )    g-LVkStsakdlgnvadA--yvneWstSIenVlkrYrnInaVVPGhg---
1jjta  ( 157 )    GCFIKP---ygLgnlgdA--nieaWpkSAklLkskYgkAklVVPSHs---
1znba  ( 180 )    GCMLkdnqatsignisdA--dvtaWpkTLdkVkakFpsAryVVPGhg---
1qh5a  ( 133 )    GDTLFVA---GCGkfyeg--tAdeMckALlevLGrlppdTrVyCGHeyTi
                                          aaaaaaaaa       bbbb      

                           260       270       280       290       300 
1smla  ( 230 )    nwdYaaga------rAgakaltÇkaYAdaAeqkFdgqlaketag      
1k07a  ( 268 )    dLknkyvllskgqnnPFvdptgÇknyIeqkandFytelkkqetg      
3bc2   ( 212 )    -------------------evgdkgLLlhTldlLk               
1jjta  ( 199 )    -------------------evgdaslLklTleqAvkglneskk       
1znba  ( 225 )    -------------------dyggteLIehTkqiVnqyiestskp      
1qh5a  ( 178 )    nNLkFArhVEp-----------gnaaIrekLawAkekysigepTVpStLa
                                          aaaaaaaaaaaaaaaa          

                           310       320       330       340  
1smla                                                         
1k07a                                                         
3bc2                                                          
1jjta                                                         
1znba                                                         
1qh5a  ( 217 )    eEftYNPFMrVrektVqqhagetdpvtTMraVRrekdqfkmprd
                                                              


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