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Align your sequence(s)

Kinesin motor, catalytic domain ATPase

class : alpha beta number of structures : 4 average size : 335 average PID : 45 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1bg2 rasmol 3 - 325 - kinesin heavy chain (ubiquitous kinesin heavy chain) Homo sapiens 1.8 21.59
2kin rasmol 2 A 351 B neuronal kinesin heavy chain Rattus norvegicus 1.9 19.4
3kar rasmol 385 - 722 - kinesin-like protein kar3 (nuclear fusion protein) Saccharomyces cerevisiae 2.3 17.5
2ncd rasmol 303 A 670 A claret segregational protein Drosophila melanogaster 2.50 22.6
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
SMART : KISc  
PFAM : kinesin  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1bg2   (   3 )                                              dlaecnIk
2kina  (   2 )                                             adpaecsIk
3kar   ( 385 )                                                  gnir
2ncda  ( 303 )    lrqrteellrcneqqaaeletckeqlfqsnmerkelhntvMdlr--gnir
                                                                  bb

                           60        70        80        90        100 
1bg2   (  11 )    VMCRFRplnesEvnrgDkyiAkfqg------edtVvIa-----------s
2kina  (  11 )    VmCRFRplneaEilrgDkfiPkfkg------eetVvig----------qg
3kar   ( 389 )    VyCRIRpalknlEns-dtSlinvnefddnsgvqsMeVtki----qntaqv
2ncda  ( 351 )    VFCRIRppleseen-rmcCtwtyhd------estVeLqSidaqakskmgq
                  bbbbb               bbbb         bbbb             

                           110       120       130       140       150 
1bg2   (  44 )    kpYaFdrVFqsstsqeqVYndCAkkIVkdVLeGynGTIFAyGqtsSGKth
2kina  (  45 )    kpYvFdrVLppnTtQeqVynaCAkqIVkdVLeGynGTIFAYGqtsSGKth
3kar   ( 434 )    hefkFdkIFdqqdtNvdVfke-VgqlVqsSLdgynVCIFAYGqtgSGKTf
2ncda  ( 394 )    qifsFdqVfhplssQsdIfem-VspLIqSALDgynICIFAyGqtgSGKty
                   bbb  bbb     aaaaaaa  aaaaaaaa    bbbbbb      aaa

                           160       170       180       190       200 
1bg2   (  94 )    TMegkLhdpegmGIIPrIVqdIFnyiysmde-nleFhIkVsYFEIyldkI
2kina  (  95 )    TMeGklhdpqlmGIiPrIAhdIFdhiysmde-nlefhIkVSYFEIyldkI
3kar   ( 483 )    TMLnp-----gdGIIpsTIshIfnwinklktkgwdYkVnCeFIEIynenI
2ncda  ( 443 )    TMdGv---pesvGViprTVdlLfdsIrgyrnlgweYeIkAtFLEIynevL
                  aa           aaaaaaaaaaaaaaaa    bbbbbbbbbbbb    b

                           210       220       230       240       250 
1bg2   ( 143 )    RDLLdvsktnlsVhed-kn-rvPyVkgCterfVcspdeVMdTIdeGksnr
2kina  ( 144 )    rDLLdvsktnlaVhed-kn-rvpyVkgCterfVsspeeVmdVIdeGkanr
3kar   ( 528 )    vDllrslk--heIrhdqet-ktttItnVtsckLeseemVeiilkkAnklR
2ncda  ( 490 )    yDlLsneqkdMeIrmaknnkndIyvsniteetVldpnhLrhlmhtAkmnr
                  bb          bbb       bbb     bbb  aaaaaaaaaaaaaa 

                           260       270       280       290       300 
1bg2   ( 191 )    hvaVtnmneHssrSHSIFlInVkQentqteqklsGkLYLVdLAGSekvsk
2kina  ( 192 )    hvavtnMnehssrSHsIFlInIkQenvetekklsGkLyLVdLAGSekva-
3kar   ( 586 )    stastasnehssrSHSIFiIhLsGsNaktgahsyGtLNLVdLAGSerinv
2ncda  ( 540 )    atastagnerssrSHaVtkLeLiGrhaekqeisvGsINLVdLAGsesp--
                         aaaaa  bbbbbbbbbbbb     bbbbbbbbbb         

                           310       320       330       340       350 
1bg2   ( 241 )    tgaegavldeakninkSLsALGnVIsaLae-gst--yvpyrdSkMTrILq
2kina  ( 253 )    -------------kninksLsALgnVIsaLaegtkthVpyrdSkMTrILq
3kar   ( 636 )    sd----rlretqninkSlscLgdVIhalgqpdstkrhipfrnSkLTyLLq
2ncda  ( 598 )    ------------ninrSLseLtnVIlallq-kqd--hipyrnSkLTHlLm
                                 aaaaaaaaaaaaaa          333 aaaaa  

                           360       370       380       390       400 
1bg2   ( 288 )    dSLGgncrTTIVICCSPSsyneseTksTLlfGqrAkti            
2kina  ( 290 )    dSLdgnCrTTIVICCSPSvfneaeTksTLmFGqrAktIkNtVsvnlelta
3kar   ( 686 )    ysLtgdSkTLMFVNISPSSshineTLnSLrfAskvns             
2ncda  ( 633 )    pSLggnSKTLMFINVSPFqdcfqeSvkSLrfAasvnsc            
                         bbbbbbbb   333aaaaaaaaaaaaaa               

                           410 
1bg2                          
2kina  ( 340 )    eewkkkyekeke
3kar                          
2ncda                         
                              


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