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Align your sequence(s)

thiamine pyrophosphate enzymes

class : alpha beta number of structures : 4 average size : 539 average PID : 20 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1pvd rasmol 2 A 546 A pyruvate decarboxylase isozyme 1 Saccharomyces cerevisiae 2.30 16.5
1pox rasmol 9 A 550 A pyruvate oxidase Lactobacillus plantarum 2.10 16.2
1bfd rasmol 2 - 524 - benzoylformate decarboxylase Pseudomonas putida 1.6 15.2
1zpd rasmol 2 A 566 A pyruvate decarboxylase Zymomonas mobilis 1.86 16.2
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : TPP_enzymes_C  TPP_enzymes_N  TPP_enzymes  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1pvda  (   2 )    seitLGkYLFeRLkqvnVnTVFGlpgdfNlsLldkIyeVe-gMrwAgNan
1poxa  (   9 )    tnilAGaAVIkVLEaWgVdHLYGipggsInSImdaLsaerdrIhyIqVrh
1bfd   (   2 )      asVhgtTYeLLrrqgIdTVFGnpgsNElpFlkdfpe---dFryIlAlq
1zpda  (   2 )     sytVGtYLAeRLvqIgLkhHFAvagdYNlvLldNLllnk-nMeQvyCcn
                      aaaaaaaaaaa    bbbb      aaaaa         bbbb   

                           60        70        80        90        100 
1pvda  (  51 )    elNAAYAADGYARIkg-MSCIITTFGvGElsAlnGIaGSyaEhVGVLHVV
1poxa  (  59 )    eeVGAMAAAAdAkLtgkIGVCFGsAGpGGthLmnGLyDAredhvPVLALI
1bfd   (  47 )    eaCVVGIADGyAQAsrkpAFINLhSaaGTgnAmgaLsNAwnShSPLIVTA
1zpda  (  50 )    elNCGFSAEGYARAkg-AAAAVVTYSvGAlsAfdAIGGAyaenlPVILIS
                  aaaaaaaaaaaaaaa   bbbbb   aaaaa aaaaaaaaa    bbbbb

                           110       120       130       140       150 
1pvda  ( 100 )    Gvpsis        hhtlgngdftvFhrmSaniSettamItdiatApaeI
1poxa  ( 109 )    GQfgttgmnm--dtfqE-m-----nEnpiYadVAdynvtavnAatLPhvI
1bfd   (  97 )    gQqtramigv--eallTNv-----dAanlPrplVkwSyePasaaeVPhAM
1zpda  (  99 )    GAPnnndhaaghvlhhAlgktdYhyQlemAkniTaaAeAIytpeeApakI
                  bb                                 bbbb      aaaaa

                           160       170       180       190       200 
1pvda  ( 150 )    drCIrtTyv-tQrPVYLGLPanLVdlnVp----akllqtpIdmslkpNda
1poxa  ( 151 )    DeAIrrAya-hqgVAVVQIPvdLPwqqIsaedwyasannyqtpllpepdv
1bfd   ( 140 )    SrAIhmAsmapqGPVYLSVPydDWdkdAd-pqshhlfdrhvsss-vrlnd
1zpda  ( 149 )    dhVIkTAlr-ekkPVYLEIAcnIAsmpcaaPgpasaLf-----ndeaSde
                  aaaaaaaaa a   bbbbbb             33333           a

                           210       220       230       240       250 
1pvda  ( 195 )    esekeVidtIlalVkdAknPVILADACCsrhdVkaeTkkLIdlTqFPAFV
1poxa  ( 200 )    qaVtrLTqtLla----AerPLIYYGiGAr--kAgkeLeqLSktLkIPLMS
1bfd   ( 188 )    qdLdilvkaLns----AsnPAIVLGpDVDaanANadCvmLAerLkApVwV
1zpda  ( 193 )    asLnaAVdeTlkfIanrdkVAVlVGskLraagAeeAAvkFTdaLgGAVAT
                  aaaaaaaaaaaa       bbbbb         aaaaaaaaaaa   bbb

                           260       270       280       290       300 
1pvda  ( 245 )    t-pmGKGSIsEqhprYGgVyvgtlSkpevkeaVesAdLILSVGAllsdk 
1poxa  ( 244 )    T-YPAKgiVAdrypAYLGSAn-rVAqkPAneALaqAdVVLFVGNnYpfAe
1bfd   ( 234 )    APsApRCPFpTrhpCFrglMp--aGiaaISqlLeghdvVLVIGApVFryh
1zpda  ( 243 )    m-AaAKSfFpEenalYIGTsWGeVSypgVekTmkeAdAvIALAPvfndys
                    333          bbbb       aaaaaaaa   bbbbb        

                           310       320       330       340       350 
1pvda  ( 303 )              tkniVeFhsd-----hMkIrnatfpgVqMkfVLqkLltnI
1poxa  ( 292 )    ---vskaFknTryFLQIDidpaklgkrhkTdiaVl-AdAqkTLaaIlaqV
1bfd   ( 282 )    qydpgqylkpgTrLISVTcdplEaarapmg-daiv-adIgaMAsaLAnlV
1zpda  ( 292 )    TTGwtdipdpkk-lVlAepr-----SVvVngirfpsVhLkdYLtrLaqkV
                              bbbbbb             bbbb   aaaaaaaaaaa 

                           360       370       380       390       400 
1pvda  ( 338 )    adaA------kgYkpvavPartpanaavpastpLkQewMWnqLgnFLqeg
1poxa  ( 338 )    serestpwwqanlanVknWraylasledkqegpLqayQVLrAVnkIaepd
1bfd   ( 330 )    eessr-----qlptaap----epakv-dQdagrLhpetVFdTLndmApen
1zpda  ( 336 )    skktgSldffksl----nagelkkaapadpsapLvnaEIarqVealLtpn
                                                     aaaaaaaaaa     

                           410       420       430       440       450 
1pvda  ( 382 )    DVVIAEtGTSafGInq-TtFpnnTygIsQvlwgSIGFTTGATLGAAFAAe
1poxa  ( 388 )    AIYSIDVGdINLnANrHLkLtpsNrhiTSnlfaTMGvGIPGAIAAklnyp
1bfd   ( 370 )    AIYLNEStsttaqMWqrLnMrnpgSYYfCAa-gglgFALPAAIGVQlAep
1zpda  ( 382 )    TTVIAETGDSWFNAQr-MkLpngArVEYEmqwghIGWSVPAAFGYAVGap
                   bbbb   aaaaaaa         bbb          aaaaaaaaaaa  

                           460       470       480       490       500 
1pvda  ( 431 )    eidpkkRVILFIGDGSLqlTvqEIsTMIrwgLkPYLFVLnNdGyTieKli
1poxa  ( 438 )    ----erqVFNLAGDGGAsmTmqDLvTQvqyhlpVINVVFTNcqyGFikde
1bfd   ( 419 )    ----erqVIAVIgDgSAnySisALwTAaqynIpTIFVIMnngtygalrwf
1zpda  ( 431 )    ----errnILMVGDGSFqlTaqEVaqMVrlklpVIIFLiNNyGyTIevmi
                         bbbbbbaaaaaaa333aaaaaa     bbbbbb    aaaa  

                           510       520       530       540       550 
1pvda  ( 481 )    hgpk----aqyNeiqgwdHlslLptfg------AkdyethrVatTgeWdk
1poxa  ( 484 )    qedtnqndfigVefndidFskiAdgvh---------MqAfrVnkIeqLpd
1bfd   ( 465 )    agvleaenvpgldvpgidFralAkgyg---------VqalkAdnleqLkg
1zpda  ( 477 )    hd------gpyNniknwdYaglMevfNgnggydsgaAkGlkAktGgeLae
                                    aaaaaaa            bbbbb  aaaaaa

                           560       570       580       590       
1pvda  ( 521 )    lTqdksFndn-s-kIRMIEImLpvfdap                     
1poxa  ( 525 )    vFeq--AkaiAqhePVLIDAvItgdrPl                     
1bfd   ( 506 )    sLqe--Alsa--kgPVLIEVsTv                          
1zpda  ( 521 )    Aikv--Alan-tdGPTLIECfIgredCteeLvkWGkrVaaansrkpvnk
                  aaaa  aaa      bbbbbb                            


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