thiamine pyrophosphate enzymes
|
class : alpha beta |
number of structures : 4 |
average size : 539 |
average PID : 20
% |
PDB
code |
start
residue |
start
chain |
end
residue |
end
chain |
name |
source |
resolution |
R-factor |
1pvd
 |
2 |
A |
546 |
A |
pyruvate decarboxylase isozyme 1 |
Saccharomyces cerevisiae |
2.30 |
16.5 |
1pox
 |
9 |
A |
550 |
A |
pyruvate oxidase |
Lactobacillus plantarum |
2.10 |
16.2 |
1bfd
 |
2 |
- |
524 |
- |
benzoylformate decarboxylase |
Pseudomonas putida |
1.6 |
15.2 |
1zpd
 |
2 |
A |
566 |
A |
pyruvate decarboxylase |
Zymomonas mobilis |
1.86 |
16.2 |
|
pir |
ali |
malform |
joy-html |
colour postscript |
postscript |
superimposed coordinates
(RasMol)
|
10 20 30 40 50
1pvda ( 2 ) seitLGkYLFeRLkqvnVnTVFGlpgdfNlsLldkIyeVe-gMrwAgNan
1poxa ( 9 ) tnilAGaAVIkVLEaWgVdHLYGipggsInSImdaLsaerdrIhyIqVrh
1bfd ( 2 ) asVhgtTYeLLrrqgIdTVFGnpgsNElpFlkdfpe---dFryIlAlq
1zpda ( 2 ) sytVGtYLAeRLvqIgLkhHFAvagdYNlvLldNLllnk-nMeQvyCcn
aaaaaaaaaaa bbbb aaaaa bbbb
60 70 80 90 100
1pvda ( 51 ) elNAAYAADGYARIkg-MSCIITTFGvGElsAlnGIaGSyaEhVGVLHVV
1poxa ( 59 ) eeVGAMAAAAdAkLtgkIGVCFGsAGpGGthLmnGLyDAredhvPVLALI
1bfd ( 47 ) eaCVVGIADGyAQAsrkpAFINLhSaaGTgnAmgaLsNAwnShSPLIVTA
1zpda ( 50 ) elNCGFSAEGYARAkg-AAAAVVTYSvGAlsAfdAIGGAyaenlPVILIS
aaaaaaaaaaaaaaa bbbbb aaaaa aaaaaaaaa bbbbb
110 120 130 140 150
1pvda ( 100 ) Gvpsis hhtlgngdftvFhrmSaniSettamItdiatApaeI
1poxa ( 109 ) GQfgttgmnm--dtfqE-m-----nEnpiYadVAdynvtavnAatLPhvI
1bfd ( 97 ) gQqtramigv--eallTNv-----dAanlPrplVkwSyePasaaeVPhAM
1zpda ( 99 ) GAPnnndhaaghvlhhAlgktdYhyQlemAkniTaaAeAIytpeeApakI
bb bbbb aaaaa
160 170 180 190 200
1pvda ( 150 ) drCIrtTyv-tQrPVYLGLPanLVdlnVp----akllqtpIdmslkpNda
1poxa ( 151 ) DeAIrrAya-hqgVAVVQIPvdLPwqqIsaedwyasannyqtpllpepdv
1bfd ( 140 ) SrAIhmAsmapqGPVYLSVPydDWdkdAd-pqshhlfdrhvsss-vrlnd
1zpda ( 149 ) dhVIkTAlr-ekkPVYLEIAcnIAsmpcaaPgpasaLf-----ndeaSde
aaaaaaaaa a bbbbbb 33333 a
210 220 230 240 250
1pvda ( 195 ) esekeVidtIlalVkdAknPVILADACCsrhdVkaeTkkLIdlTqFPAFV
1poxa ( 200 ) qaVtrLTqtLla----AerPLIYYGiGAr--kAgkeLeqLSktLkIPLMS
1bfd ( 188 ) qdLdilvkaLns----AsnPAIVLGpDVDaanANadCvmLAerLkApVwV
1zpda ( 193 ) asLnaAVdeTlkfIanrdkVAVlVGskLraagAeeAAvkFTdaLgGAVAT
aaaaaaaaaaaa bbbbb aaaaaaaaaaa bbb
260 270 280 290 300
1pvda ( 245 ) t-pmGKGSIsEqhprYGgVyvgtlSkpevkeaVesAdLILSVGAllsdk
1poxa ( 244 ) T-YPAKgiVAdrypAYLGSAn-rVAqkPAneALaqAdVVLFVGNnYpfAe
1bfd ( 234 ) APsApRCPFpTrhpCFrglMp--aGiaaISqlLeghdvVLVIGApVFryh
1zpda ( 243 ) m-AaAKSfFpEenalYIGTsWGeVSypgVekTmkeAdAvIALAPvfndys
333 bbbb aaaaaaaa bbbbb
310 320 330 340 350
1pvda ( 303 ) tkniVeFhsd-----hMkIrnatfpgVqMkfVLqkLltnI
1poxa ( 292 ) ---vskaFknTryFLQIDidpaklgkrhkTdiaVl-AdAqkTLaaIlaqV
1bfd ( 282 ) qydpgqylkpgTrLISVTcdplEaarapmg-daiv-adIgaMAsaLAnlV
1zpda ( 292 ) TTGwtdipdpkk-lVlAepr-----SVvVngirfpsVhLkdYLtrLaqkV
bbbbbb bbbb aaaaaaaaaaa
360 370 380 390 400
1pvda ( 338 ) adaA------kgYkpvavPartpanaavpastpLkQewMWnqLgnFLqeg
1poxa ( 338 ) serestpwwqanlanVknWraylasledkqegpLqayQVLrAVnkIaepd
1bfd ( 330 ) eessr-----qlptaap----epakv-dQdagrLhpetVFdTLndmApen
1zpda ( 336 ) skktgSldffksl----nagelkkaapadpsapLvnaEIarqVealLtpn
aaaaaaaaaa
410 420 430 440 450
1pvda ( 382 ) DVVIAEtGTSafGInq-TtFpnnTygIsQvlwgSIGFTTGATLGAAFAAe
1poxa ( 388 ) AIYSIDVGdINLnANrHLkLtpsNrhiTSnlfaTMGvGIPGAIAAklnyp
1bfd ( 370 ) AIYLNEStsttaqMWqrLnMrnpgSYYfCAa-gglgFALPAAIGVQlAep
1zpda ( 382 ) TTVIAETGDSWFNAQr-MkLpngArVEYEmqwghIGWSVPAAFGYAVGap
bbbb aaaaaaa bbb aaaaaaaaaaa
460 470 480 490 500
1pvda ( 431 ) eidpkkRVILFIGDGSLqlTvqEIsTMIrwgLkPYLFVLnNdGyTieKli
1poxa ( 438 ) ----erqVFNLAGDGGAsmTmqDLvTQvqyhlpVINVVFTNcqyGFikde
1bfd ( 419 ) ----erqVIAVIgDgSAnySisALwTAaqynIpTIFVIMnngtygalrwf
1zpda ( 431 ) ----errnILMVGDGSFqlTaqEVaqMVrlklpVIIFLiNNyGyTIevmi
bbbbbbaaaaaaa333aaaaaa bbbbbb aaaa
510 520 530 540 550
1pvda ( 481 ) hgpk----aqyNeiqgwdHlslLptfg------AkdyethrVatTgeWdk
1poxa ( 484 ) qedtnqndfigVefndidFskiAdgvh---------MqAfrVnkIeqLpd
1bfd ( 465 ) agvleaenvpgldvpgidFralAkgyg---------VqalkAdnleqLkg
1zpda ( 477 ) hd------gpyNniknwdYaglMevfNgnggydsgaAkGlkAktGgeLae
aaaaaaa bbbbb aaaaaa
560 570 580 590
1pvda ( 521 ) lTqdksFndn-s-kIRMIEImLpvfdap
1poxa ( 525 ) vFeq--AkaiAqhePVLIDAvItgdrPl
1bfd ( 506 ) sLqe--Alsa--kgPVLIEVsTv
1zpda ( 521 ) Aikv--Alan-tdGPTLIECfIgredCteeLvkWGkrVaaansrkpvnk
aaaa aaa bbbbbb