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Align your sequence(s)

Fe/Mn superoxide dismutase

class : multi domain number of structures : 8 average size : 198 average PID : 42 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1ar5 rasmol 1 A 201 A superoxide dismutase Propionibacterium freudenreichii subspec. shermanii 1.60 16.3
1ids rasmol 2 A 199 A iron superoxide dismutase Mycobacterium tuberculosis 2.00 16.7
3mds rasmol 1 A 203 A manganese superoxide dismutase Thermus thermophilus HB8 1.80 19.0
1n0j rasmol 1 A 198 A superoxide dismutase Homo sapiens 2.20 17.1
3sdp rasmol 5 A 190 A iron superoxide dismutase Pseudomonas ovalis 2.10 23.2
1isa rasmol 1 A 192 A iron superoxide dismutase Escherichia coli 1.80 18.8
1mmm rasmol 1 A 205 A iron-substituted manganese superoxide dismutase Escherichia coli 2.20 19.2
1sss rasmol 4 A 208 A superoxide dismutase Sulfolobus solfataricus 2.30 16.6
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : sodfe_C  sodfe  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1ar5a  (   1 )       avytlpeLpydysaLepyIsgeIMelHHdkhHkayVdgAntAld-kl
1idsa  (   2 )       aeytlpdLdwdygaLephIsgqINelHhskhHatyvkgAndAva-kl
3mdsa  (   1 )      pypFklpdLgypyeaLephIdakTMeiHHqkhHgayVtnLnaaLe-ky
1n0ja  (   1 )        khslpdLpydygaLephInaqIMqlHHskhHaayvnnLnvTee-ky
3sdpa  (   5 )          pplpyahd--ALqphIskeTLeyHhdkhhnty-vvnlnnlvpgt
1isaa  (   1 )        sfelpaLpyakdaLaphIsaeTIeyHygkhHqtyVtnLnnlIk--g
1mmma  (   1 )        sytlpsLpyaydaLephFdkqtMeiHhtkhHqtyVnnAnaaLe-sl
1sssa  (   4 )    iqfkkyelppLpYkidaLepyIskdIIdvHynghHkgyVngAnslle-rl
                                         aaaaaaaaa aaaaaaaaaaaaa    

                           60        70        80        90        100 
1ar5a  (  47 )    aeard-------kadfgainklekdlafnlaGhvNHsvFWkNMapkgsap
1idsa  (  48 )    eeara-------kedhsaillneknlafnlaGhvnHtiWWkNLsp--ngg
3mdsa  (  48 )    pylhgveVevLLrhlaaLpqdIqtaVrnnGGGhlNHslFWrLLtp--gga
1n0ja  (  46 )    qeAla-------kgdvtaqialqpalkfngGGhiNHsiFWtNLsp--ngg
3sdpa  (  46 )    pefegktleeIVksSs-------ggifnnAAQvwNHtfywnCLsp--dag
1isaa  (  45 )    tafegksleeIIrsSe-------ggvfnnAAQVwNHtfYWnCLap--naG
1mmma  (  46 )    pefanlpVeeLItkLdqLpadkktvLrnnAGGhANHslFWkgLkk--gTt
1sssa  (  53 )    ekvvkgdlq---tgq-ydiqgIirgltfninGhkLHalYWenMApsgkGg
                                        aaaaaaaaaaaaaaaaaaa         

                           110       120       130       140       150 
1ar5a  (  90 )    erPtdeLgaaIdeffgsfdnMkaqFtaaAtgIqgsGWASLVWdplgkrIn
1idsa  (  89 )    dkPtgeLaaaIadafgsfdkFraqFhaaAttVqgsGWAaLGwdtlgnkLl
3mdsa  (  96 )    kePvgeLkkaIdeqfggfqaLkekLtqaAmgrfgsGWAWLVkdp-fgkLh
1n0ja  (  87 )    gePkgeLleAIkrdfgsFdkFkekLtaaSvgvqgsGWGWLGfnkerghLq
3sdpa  (  87 )    gqptgaladaInaafgsfdkFkeeFtktSvgTfgsGWAWlVka-d-gsla
1isaa  (  86 )    gePtgkVaeaIaaSfgsfadFkaqFtdaAiknfgsGWTWLVknsd-gkLa
1mmma  (  94 )    lq--gdLkaAIerdfgsvdnFkaeFekaAasrfgsGWAWLVLk--gdkLa
1sssa  (  99 )    gkPggaLadlInkqygsfdrFkqvFtetAnsLpgtGWAVLYydtesgnLq
                      aaaaaaaaaaa  aaaaaaaaaaaaa     bbbbbbb      bb

                           160       170       180       190       200 
1ar5a  ( 140 )    TlqFydHqnnlpa------gsipLLQLDMwehAFylqyknvkgdYV-ksW
1idsa  ( 139 )    IfqVydHqtnfpl------givpLLLLDMwehAFylqyknvkvdFA-kaF
3mdsa  ( 145 )    VlstpnQdNPvme------gftpIVGIDVwehAYylkyqnrradYL-qaI
1n0ja  ( 137 )    iaaCpnQdpLqgtt-----gLipLLGIDVwehAYylqyknvrpdYL-kaI
3sdpa  ( 135 )    lcstigagAPlts------gdtpLLTCDVwehAYy-idyrnlrpKYveaF
1isaa  ( 135 )    ivstsnAgTPltt------datpLLTVDVwehAYyidyrnarpgYL-ehF
1mmma  ( 140 )    VvsTanQDSPlMgeaiSgAsgfPIMGLDVwehAYylkfqnrrpdYI-keF
1sssa  ( 149 )    imtFenHfqnhia------eipiILILDEfehAYylqyknkradYV-naW
                  bbbbb                bbbbbbb  333 aaaa   aaaaa aaa

                           210       
1ar5a  ( 183 )    wnVVnWddValrFseArva
1idsa  ( 182 )    wnVVnWadVqsryaaats 
3mdsa  ( 188 )    wnvLNWdvAeeffkka   
1n0ja  ( 181 )    WnVInWenVterYmackk 
3sdpa  ( 178 )    wNLvnWafVae--eg    
1isaa  ( 178 )    waLVnwefVaknlaa    
1mmma  ( 189 )    wnVVnWdeAaarFaakk  
1sssa  ( 192 )    WnVVnWdaAekkLqkyl  
                       aaaaaaaaaa    


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