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Align your sequence(s)

Ribulose bisphosphate carboxylase large chain

class : multi domain number of structures : 7 average size : 453 average PID : 50 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1gk8 rasmol 7 A 475 A Ribulose-1,5 bisphosphate carboxylase/oxygenase Chlamydomonas reinhardtii 1.4 14.9
8ruc rasmol 9 A 475 A ribulose-1,5-bisphosphate carboxylase/oxygenase Spinacia oleracea 1.6 21.1
1rbl rasmol 9 A 475 A ribulose 1,5 bisphosphate carboxylase/oxygenase Synechococcus, Strain Pcc 6301 2.2 20.0
1bxn rasmol 22 A 467 A ribulose bisphosphate carboxylase large chain Alcaligenes eutrophus 2.7 26.6
1bwv rasmol 7 A 478 A ribulose bisphosphate carboxylase Galdieria partita 2.40 16.3
1geh rasmol 12 A 443 A Ribulose-1,5-bisphosphate carboxylase/oxygenase Thermococcus kodakaraensis 2.80 22.4
5rub rasmol 2 A 457 A ribulose-1,5-bisphosphate carboxylase/oxygenase Rhodospirillum rubrum 1.7 N/A
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : RuBisCO_large_N  RuBisCO_large  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1gk8a  (   7 )    tkagagfkagvkdyrlt-Yytpdyvvrd-----tDILAAFRMtPqpgvpp
8ruca  (   9 )      asvefkagvkdyklt-yytpeyetld-----tDIlAAFRVsPqpgvpp
1rbla  (   9 )      saagykagvkdyklt-yytpdytpkd-----tDLlAAFRFsPqpgvpa
1bxna  (  22 )                 ykmg-Ywdgdyvpkd-----tDLlALFrItPqdgvdp
1bwva  (   7 )    riknsryesgvipyakMgYwnpdyqvkd-----tDVLALFRVtpqpgvdp
1geha  (  12 )                      yvdkgyepsk----krdIIAVFrVtpaegyti
5ruba  (   2 )                dqssr-YvnlalkeedliaggehVLCAYiMkpkagygy
                                                     bbbbbbbbb     a

                           60        70        80        90        100 
1gk8a  (  51 )    eECGAaVAAeSStGtwttv-wtdgltsldrykGrCydiepvpgednqyIA
8ruca  (  51 )    eeAGAaVAAeSStgtwttv-wtdgltnldrykGrCyhiepvageenqyIC
1rbla  (  51 )    deAGAAIAAeSStgtwttv-wtdlltdmdrykGkCyhiepvageensyFA
1bxna  (  54 )    veAAAAVAGeSstAtwtvv-wtdrltaCdmyrAkAyrvdpVpnnpeqffC
1bwva  (  51 )    ieAAAAVAGeSStatwtVv-wtdlltaadlyRAkAykvdqVpnnpeqyFA
1geha  (  40 )    eqAAGaVAaeSstgtwttlypwyeqerwadlsAkAydfhdmg--dgSwIV
5ruba  (  39 )    vaTAAhFAaeSStgtr-------------gvdALVYeVde-----areLT
                  aaaaaaaaaa                 aaaa  bbbbbbb       bbb

                           110       120       130       140       150 
1gk8a  ( 100 )    yVAY-idlFe------egsVtnMftsIvgnVfgfkaLraLRLEDLrIPpa
8ruca  ( 100 )    yVAYpldlFe------egsVtnMftsIvgnVfgfkaLraLRLEDLrIPva
1rbla  ( 100 )    fIAYpldlFe------egsVtnIltsIvgnVfgfkaIrsLRLEDIrFPva
1bxna  ( 103 )    yVAYdlslFe------egsIanLtasIignVfsfkpIkAARLEDMrFPva
1bwva  ( 100 )    yIAYeldlFe------egsIanLTasIignVfgfkaVkaLRLEDMrLPla
1geha  (  88 )    rIAYpfhafe------eanLpgLlasIAgnIfgmkrVkgLrLEDLyFPek
5ruba  (  82 )    kIAYPvalFdrnitdgkAmIasFltlTMgnNqgmgdVeyAKMhDFyVPea
                  bbbb 333           aaaaaaaaa  333   bbbbbbbbbb  aa

                           160       170       180       190       200 
1gk8a  ( 144 )    YVktFvG-PhGiqvErdkLnky---grGLLGCTIkpklglsaknYGraVy
8ruca  ( 144 )    YVktFqGPPhGiqvErdkLnky---grPLLGCTIkpklglsaknYGraVy
1rbla  ( 144 )    LVktFqGPPhGiqvErdlLnKy---grPMLGCTIkpklglsaknYGraVy
1bxna  ( 147 )    YVktFaGPSTGIivErerLdKf---grPLLGAtTkpklglsGrnYGrvVy
1bwva  ( 144 )    YLktFqGPATGVilERerLdkf---grPLLGCTTkpklglsGknYGrvVy
1geha  ( 132 )    lIrefdGPafGiegVrkmLeIk---drPIYGVVPkpkvgysPeeFeklAy
5ruba  ( 132 )    YralFdGPsvnIsaLWkvLgrpevdGgLVVGtiIkpklglrpkpFAeaCh
                  aa         aaaaaaaa         bbb          aaaaaaaaa

                           210       220       230       240       250 
1gk8a  ( 191 )    eCLrggLDFT-DDenVnsqpfMrwrdRFlfVaeAIykAqaetgevKGHYL
8ruca  ( 191 )    eCLrggLDFT-DDenVnsqpfMrwrdRFlfCaeaLykAqaetgeiKGHYL
1rbla  ( 191 )    eCLrggLDFTKDDenInsqpfQrwrdRFlfVAdaIhkSqaetgeiKGHYL
1bxna  ( 194 )    eGLkggLDFMKDDenInsqpfmhwrdRFlfVmdaVnkAsaatgevKGSYL
1bwva  ( 191 )    eALkggLDFV-DDenInsqpfMrwreRYlfTMeavnkAsaatgevKGHYL
1geha  ( 179 )    dLLsngADYMKDDenLtspwyNrFeeRAeiMakiIdkVenetgekKTWFA
5ruba  ( 182 )    afWlG-GDFIKnDepqgnqpfaplrdtIalVAdAMrrAqdetgeaKLFSA
                  aaaa    bb             aaaaaaaaaaaaaaaaaaa    bb b

                           260       270       280       290       300 
1gk8a  ( 241 )    NAtAgtceeMmkrAv-Akel-----gVpIIMHDYLtggftaNtsLAiyCr
8ruca  ( 241 )    NAtAgtcedMmkrAvfArel-----gVpIVMHDYLtggftaNttLShyCr
1rbla  ( 241 )    NVtAptceeMmkRAefAkel-----gMpIIMHDFltagftaNttLAkwCr
1bxna  ( 244 )    NVtAgtmeeMyrrAefAksl-----gSvIIMVd-livgwtcIqsMSnwCr
1bwva  ( 241 )    NVtaatmeeMyarAnfAkel-----gSvIIMID-lvigytaIqtMAkwAr
1geha  ( 229 )    NIta-dlleMeqrLevLadl-----gLkHAMVDVvitgwgaLryIrdlAa
5ruba  ( 231 )    nItaddpfeIiarGeyVletFgeNashVALLVdGyvagaaAIttArrrfp
                  b     aaaaaaaaaaaaa         bbbbb     aaaaaaaaaaaa

                           310       320       330       340       350 
1gk8a  ( 286 )    dngLLLHIHRamhaviDr-qrnhgiHFRVLAKALRMSGGDHLHSgTvvGk
8ruca  ( 286 )    dngLLLHIHRamhavidr-qknhgmHFRVLAKALRLSGGDHIHSgTvvGk
1rbla  ( 286 )    dngVLLHIHRamhaviDr-qrnhgiHFRVLAKCLRLSGGDHLHSgTvvGk
1bxna  ( 288 )    qndMILHLhRaghgtyTr-qknhgvSFRVIAKWLRLAGVDHMHTGTAvgk
1bwva  ( 286 )    dndMILHLHragNstySr-qknhgmNFRVICKWMRMAGVDHIHAGTvvGk
1geha  ( 273 )    dygLAIHGHramhaafTr-npyhgismFVLAKLYRLIGIDQLHVgtaeg-
5ruba  ( 281 )    --dnFLHYhraghgavTspqskrgytafVHCKMARLqGASGIhTgts---
                  a   bbbbb    aaaa      bb aaaaaaaaaaa   bbb       

                           360       370       380       390       400 
1gk8a  ( 335 )    leGereVTlGFVdLMrddyvekdrsrGIYftQdW-sMpGVMPVASGgIHV
8ruca  ( 335 )    legerdiTlGFVdLLrddytekdrsrgIYftQsWvstpGVLPVASGgIHV
1rbla  ( 335 )    legdkaSTlGFVdLMredhIeadrsrGVFftQdWasmpGVLPVASGgIHV
1bxna  ( 337 )    legdpltVqGyYnVCrdayTqtdltrgLffdQdWaslrkVMPVAsggIhA
1bwva  ( 335 )    legdpiITrGfykTLllpkLernlqEgLFfdMeWaslrkVMPVASGgIhA
1geha  ( 326 )    ---gkwdviQnArILreshYkpdenDvfHleQkFysIkaAFPTSsggLhP
5ruba  ( 335 )    ------sdraiAyMLtqdeaq-----GpfYrQsWggmkaCTPIIsggmnA
                      aaaaaaaaaaaa  bb           bb       bbbbb     

                           410       420       430       440       450 
1gk8a  ( 385 )    whMPaLVeIFg-ddACLQFGgGTlgHpwgnapGAaANrvALeaCtqArne
8ruca  ( 385 )    whMPaLTeIFg-ddSVLQFGgGTlgHpwgnapGAvANrvALeaCvqArne
1rbla  ( 385 )    whMpaLVeiFg-ddSVLQFGgGTlgHpwgnapGAtANrvALeaCvqArne
1bxna  ( 387 )    gQMhqLIhlFg-ddVVLQFggGTigHpqgiqaGAtANrvALeaMvlArne
1bwva  ( 385 )    gqMhqLIhyLg-edVVLQFGgGTigHpdgiqaGAtANrvALeaMilArne
1geha  ( 373 )    GnIqpVIeaLg-tdIVLQLGgGTlgHpdgpaAGArAVrqAIdAimq----
5ruba  ( 374 )    LrMpgfFenLgnAnVIlTAgggaFgHidgpvaGArSLrqAWqAwrd----
                    aaaaaaaa     bbb  aaaa     aaaaaaaaaaaaaaaaaaaa 

                           460       470       480       490    
1gk8a  ( 434 )    grdLareggdVIrsaçkwSpeLaaAçevwkeikfef-dtiDkl   
8ruca  ( 434 )    grdLaregntIIreAtkwSpeLaaAcevwkeikfef-pAmdtv   
1rbla  ( 434 )    grdLyreggdILreAGkwSpeLaaAldlwkeikfef-etmdkl   
1bxna  ( 436 )    grdilneGpeILrdAarwcgpLraAldtwgdi              
1bwva  ( 434 )    nrdylteGpeILreaAktcgaLrtAldlwkditfny-tstdtSdfv
1geha  ( 418 )    --------gipLdeyakthkeLarAlekwGhvtp            
5ruba  ( 420 )    --------gvpvldyArehkeLarAFeSfpgdAdqiypgWrkalgv
                     aaaaaaaaaaaaaa  aaaaaaaaa                  


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