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Align your sequence(s)

Ribulose bisphosphate carboxylase large chain, N-terminal domain

class : alpha plus beta number of structures : 6 average size : 132 average PID : 46 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1rbl rasmol 9 A 147 A ribulose 1,5 bisphosphate carboxylase/oxygenase Synechococcus, Strain Pcc 6301 2.2 20.0
1gk8 rasmol 7 A 147 A ribulose-1,5 bisphosphate carboxylase/oxygenase Chlamydomonas reinhardtii 1.4 14.9
1bxn rasmol 22 A 150 A ribulose bisphosphate carboxylase large chain Alcaligenes eutrophus 2.7 26.6
1bwv rasmol 7 A 147 A ribulose bisphosphate carboxylase Galdieria partita 2.40 16.3
1geh rasmol 12 A 135 A Ribulose-1,5-bisphosphate carboxylase/oxygenase Thermococcus kodakaraensis 2.80 22.4
5rub rasmol 2 A 135 A ribulose-1,5-bisphosphate carboxylase/oxygenase Rhodospirillum rubrum 1.7 N/A
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : RuBisCO_large_N  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1rbla  (   9 )    s--aagykagvkdyklt-yytpdytpkd-----tDLlAaFrFsPqpgvpa
1gk8a  (   7 )    tkagagfkagvkdyrlt-yytpdyvvrd-----tDIlAaFrMtPqpgvpp
1bxna  (  22 )                 ykmg-Ywdgdyvpkd-----tDLlAlFrItPqdgvdp
1bwva  (   7 )    riknsryesgvipyakMgYwnpdyqvkd-----tDVlAlFrVtpqpgvdp
1geha  (  12 )                      yvdkgyepsk----krdIiAvFrVtpaegyti
5ruba  (   2 )                dqssr-YvnlalkeedliaggehVLCaYiMkpkagygy
                                                     bbbbbbbbb     a

                           60        70        80        90        100 
1rbla  (  51 )    deAGAAIAAeSStgtwttv-wtdlltdmdrykGkCyhiepvageensyfA
1gk8a  (  51 )    eeCGAaVAAeSStgtwttv-wtdgltsldrykGrCydiepvpgednqyiA
1bxna  (  54 )    veAAAAVAGeSstAtwtvv-wtdrltaCdmyrAkAyrvdpVpnnpeqffC
1bwva  (  51 )    ieAAAAVAGeSStatwtVv-wtdlltaadlyRAkAykvdqvpnnpeqyfA
1geha  (  40 )    eqAAGaVAaeSstgtwttlypwyeqerwadlsAkAydfhdmg--dgSwiV
5ruba  (  39 )    vaTAAhFAaeSStgtr-------------gvdALVYeVdea-----relT
                  aaaaaaaaaa                       bbbbbb        bbb

                           110       120       130       140       150 
1rbla  ( 100 )    fIAYpldlFe------egsvtniltsIvgnVfgfkaIrsLrledirfPva
1gk8a  ( 100 )    yVAY-idlFe------egsvtnmftsIvgnVfgfkaLraLrledlriPpa
1bxna  ( 103 )    yVAYdlslFe------egsianltasIignVfsfkpIkaArledmrfPva
1bwva  ( 100 )    yIAYeldlFe------egsianltasIignVfgfkaVkaLrledmrlPla
1geha  (  88 )    rIAYpfhafe------eanlpgLlasIagnIfgmkrVkgLrledlyfPek
5ruba  (  82 )    kIAYPvalFdrnitdgkamiasFltlTmgnNqgmgdVeyAkmhdfyvPea
                  bbbb 333           aaaaaaaa   333   bbb  bbbbb  aa

                      
1rbla  ( 144 )    Lvkt
1gk8a  ( 144 )    yvkt
1bxna  ( 147 )    yvkt
1bwva  ( 144 )    ylkt
1geha  ( 132 )    lire
5ruba  ( 132 )    yral
                  aa  


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