Home   |   Search   |   Browse   |   Software   |   Help   

Align your sequence(s)

aminotransferase class-III

class : alpha beta number of structures : 4 average size : 431 average PID : 24 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
2oat rasmol 36 A 439 A ornithine aminotransferase Homo sapiens 1.95 20.4
1d7u rasmol 3 A 433 A 2,2-dialkylglycine decarboxylase Burkholderia cepacia 1.95 19.3
1dty rasmol 1 A 429 A adenosylmethionine-8-amino-7-oxononanoate aminotransferase Escherichia coli 2.14 N/A
1gtx rasmol 11 A 472 A 4-aminobutyrate aminotransferase, mitochondrial Sus scrofa 3.00 18.6
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : aminotran_3  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
2oata  (  36 )              gpptsd--difereykygahny-----hpLpvalergkgI
1d7ua  (   3 )                 lnddatfwrnarqhlvrygg----tfepmiierakgS
1dtya  (   1 )                   mttddlafderhiwhpytsmtsplpvypvvsaegC
1gtxa  (  11 )    fdydgplmkteVpGprSrelmkqlniiqnAe-----avhFfcnyeeSrgN
                                   aaaaaaaaaa                bbbbb  

                           60        70        80        90        100 
2oata  (  69 )    ylwDvegrkYFDFlSsySavNQGhchpkIvnalk-sQvdkl--tltsra-
1d7ua  (  36 )    fvyDadgraILDFtSgqMsaVLGhchpeivsVig-eyagkl--dhlfSg-
1dtya  (  36 )    eliLsdgrrLVDGMSswWaAIHGynhpqLnaamk-sqidam--shvmfge
1gtxa  (  56 )    YLvDvdgNrMLDLySqiSsipIGYshpalvklvqqpqnvstfinrpaLgi
                  bbbb    bbbb              aaaaaaaa aaa            

                           110       120       130       140       150 
2oata  ( 115 )    fynnVlgeYee-yItklF--nYhkVlPMntGveAGeTAckLArkWGytvk
1d7ua  (  82 )    mlsrPvvdLat-rLaniTppgLdrAlLLstGAeSNeAAIrMAklvt----
1dtya  (  83 )    ithapAieLcr-kLvamTpqpLecVfLAdsGSvAVeVAmkMAlqYwdak-
1gtxa  ( 106 )    lppenfveklreSLlsvaPkgMsqLiTMGsçSNenAFkTIfmwyrske
                       aaaaaa aaaaa      bbbbb  aaaaaaaaaaaaaaaaaa  

                           160       170       180       190       200 
2oata  ( 162 )    gIq------------------kykAkIVFAagNfWGrtlsAISSstdptS
1d7ua  ( 127 )    g----------------------kyEiVGFaqSwHGmtgaAasATysa-g
1dtya  ( 131 )    ge--------------------aRdrFLTFrnGyHGdtfgAmSVCDpdns
1gtxa  ( 156 )    rgqsafskeeletcminqapGcpdySILSFmgAFHGrtmgClATThSkai
                                           bbbbb        aaaa        

                           210       220       230       240       250 
2oata  ( 194 )    -ydgfgpfmpgFdiipynd-------------------lpaLeraLqdp-
1d7ua  ( 154 )    -rkgvgpaavgsfaIpAPftyrprfer-----ngaydylaeLdyaFdlId
1dtya  ( 161 )    mhslwkgyLpeNlfApaPqsrmdgewd--------erdmvGFarlMaahr
1gtxa  ( 206 )    hkidip--sfdWPiApFPrlkypleefvkenqqeearCleeVedlIvkyr
                              bbb                       aaaaaaaaaaa 

                           260       270       280       290       300 
2oata  ( 223 )    -----nVAAFMVEP-IQGeaGVvvPdpgYLmgVrelCtrhqVLFIADEIQ
1d7ua  ( 198 )    rqssgnlAAFIAEP-ILSsGGIIeLpdgYMaaLkrkCeargMlLILDEAQ
1dtya  ( 203 )    h----eIAAVIIEPIVQGaggMrMYhpeWLkrIrkiCdregILLIADEIA
1gtxa  ( 254 )    kk-kktVAGIIVEP-IQSeGgDnhAsddFFrkLRdiSrkhgCAFLVDEVQ
                        bbbbbb                aaaaaaaaaaa   bbbbb   

                           310       320       330       340       350 
2oata  ( 267 )    TGLARTGrwlAVdyen--VrPdIVLLGkALSGglypvSAVLCdddIMlti
1d7ua  ( 247 )    TGVGRTGtmFACqrdg--vtPdILTLSkTLGAgl-pLAAIVTsaaieerA
1dtya  ( 249 )    TGFGRTgklFACehAe--iaPdILCLGkaLTGgtmtLSATLTtreVaetI
1gtxa  ( 302 )    TGGGSTgkfWAHehWglddAAdVMTFskKMm-----TGGFFHkeeFrpna
                            33333       bbbb 3333      bbbbb aaaa   

                           360       370       380       390       400 
2oata  ( 315 )    kp---g--ehgStyGGnPlGCrVAiaALeVLeeenLaenAdkLGiiLrne
1d7ua  ( 294 )    hel--g-ylfytthvsDPlpAAVGlrVLdVVqrdgLvarAnvMGdrLrrg
1dtya  ( 297 )    sdgeagcfmhgPtfmGnPlACaAAnaSLaiLesgdwqqqVadIevqLreq
1gtxa  ( 347 )    p------yrIfntwlGdpSkNllLAeVInIIkredLlsnAahAGkvLltg
                                   aaaaaaaaaaaaaaaa  aaaaaaaaaaaaaaa

                           410       420       430       440       450 
2oata  ( 360 )    LmkLps---dvVtaVrGkGLLNAIvIketk------dwdAwkVClrLrdn
1d7ua  ( 341 )    Lldlmerf-dcIGdVrGrgLLLGVEIVkdrrtkepAdglGakItreCmnl
1dtya  ( 347 )    LapArd-a-emVadVrVLGAIGVVeTt-----hpVn---maaLQkfFVeq
1gtxa  ( 391 )    LldLqarypqFIsrVRGrGTFCSFdTpd--------esirnkLisiArnk
                  a          bbbbbbb  bbbbbb             aaaaaaaaaa 

                           460       470       480       490      
2oata  ( 401 )    gLlAkPth----gdiIRFAPPLvIkedeLreSIeiInkTIlsf     
1d7ua  ( 390 )    gLsMnivqlpgmGGVFRIAPPLtVsedeIdlGlslLgqAIerAl    
1dtya  ( 387 )    gVwIrPf-----gklIyLMPPYiIlpqqLqrLTaAVnrAVqdetfFcq
1gtxa  ( 433 )    GVMLgGcg----dkSIRFRPTLvFrdhHAhlFlniFsdILadfk    
                   bb           bbbb       aaaaaaaaaaaaaaaa       


For comments or questions, please send us email. Copyright © 1997-2005 The HOMSTRAD authors