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Align your sequence(s)

Fatty acid binding protein-like

class : all beta number of structures : 17 average size : 132 average PID : 36 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1lfo rasmol 1 - 127 - fatty acid-binding protein, liver Rattus norvegicus 2.30 20.2
1eio rasmol 1 A 127 A gastrotropin Sus scrofa N/A N/A
3ifb rasmol 1 A 131 A fatty acid-binding protein, intestinal Homo sapiens N/A N/A
1ifc rasmol 1 - 131 - intestinal fatty acid-binding apoprotein Rattus norvegicus 1.19 16.9
1bwy rasmol 1 A 132 A fatty acid-binding protein, heart Bos taurus N/A N/A
1hmt rasmol 1 - 131 - fatty acid binding protein, muscle Homo sapiens 1.40 11.4
1fdq rasmol 1 A 131 A fatty acid-binding protein, brain Homo sapiens 2.10 18
1pmp rasmol 1 A 131 A P2 myelin protein Bos taurus 2.70 26.8
1lif rasmol 1 - 131 - adipocyte lipid-binding protein Mus musculus 1.60 18
1b56 rasmol 3 - 135 - fatty acid-binding protein, epidermal Homo sapiens 2.05 20.7
1ftp rasmol 1 A 133 A fatty-acid-binding protein, muscle schistocerca gregaria 2.20 18.5
1cbi rasmol 1 A 136 A retinoic acid-binding protein I, cellular Mus musculus 2.70 19.6
1cbs rasmol 1 - 137 - Cellular retinoic acid binding protein II Homo sapiens 1.80 20
1crb rasmol 1 - 134 - Cellular retinol-binding protein Rattus rattus 2.10 18.8
1opb rasmol 1 A 133 A Cellular retinol-binding protein II Rattus rattus 1.90 17.3
1ggl rasmol 1 A 134 A Cellular retinol binding protein III Homo sapiens 2.31 22.9
1mdc rasmol 1 - 131 - fatty-acid-binding protein 2 manduca sexta 1.75 17.3
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : lipocalin  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1lfo   (   1 )      mnFs-gkYqVqsqenFepFMkaMgLpedlIqkGkdi--kGvSeIvhe-
1eioa  (   1 )       aft-gkYeieseknydeFmkrLalpsdaidkArnl--kiiSeVkqd-
3ifba  (   1 )       afd-stWkvdrsenydkFmekmgvnivkrklaahD--nlkLtItqe-
1ifc   (   1 )       afd-gtWkvdrnenyekFMekMginvvkrklgahD--nlkLtItqe-
1bwya  (   1 )     vdaFv-gtWklvdsknFddYMksLgVgfatrqvgnmt--KptTiievn-
1hmt   (   1 )     vdaFl-gtWkLvdsknFddYMksLgvgfatrqvAsmt--kPtTiIekn-
1fdqa  (   1 )     veaFc-atWkLtnsqnFdeYMkaLgVgfatrqvGnvT--kPtViIsqe-
1pmpa  (   1 )     snkFl-gtWkLvssenFdeYMkaLgvglatrklGnlA--kPrViIskk-
1lif   (   1 )     cdaFv-gtWklvssenfddYMkeVgVgfatrkvAgma--kpnMiIsvn-
1b56   (   3 )    tvqqLe-grWrlvdskgFdeYMkeLgvgialrkmGama--kPdCiItcd-
1ftpa  (   1 )     VkefagikYkLdsqtnfeeyMkaIgvgaierkaglal--spvieLeild
1cbia  (   1 )      pnFa-gtWkmrssenfdeLLkaLgvnamlrkvavaaaskphveIrqd-
1cbs   (   1 )      pnFs-gnWkiirsenFeeLLkvLgvnvmlrkiAvaAAskPaVeIkqe-
1crb   (   1 )     pvdFn-gyWkMlsNenFeeYLraLdVnvalrkiAnll--kpdKeIvqd-
1opba  (   1 )     tkdQn-gtWemesnenFegYMkaLdIdfatrkiAvrl--tQtKiIvqd-
1ggla  (   1 )     ppnlt-gyYrfvsqknmedylqaLnislavrkialll--kpdkeIehq-
1mdc   (   1 )       sYlgkvYsLvkqenFdgFLksAglsddkiqaLvsd--kptqkMean-
                         bbbbbbbbb aaaaaaa    aaaaaaa       bbbbbbb 

                           60        70        80        90        100 
1lfo   (  45 )    gkkVkLtItYg-skvihneFtlgee-eLeT--MtgekvkavVkmegdnkM
1eioa  (  44 )    gqnFtWsqqypgghsitntFtigkecdiet--iggkkfkAtVqmeg-gkV
3ifba  (  44 )    gnkFtVkessa-frnieVvFelgvtfnynl--adgtelrgtWsleg-nkL
1ifc   (  44 )    gnkFtVkesSn-frnidvvFelgvdfaysl--adgteLtgtWtmeg-nkL
1bwya  (  46 )    gdtViiktqSt-fknteisFklgvefdett--addrkVkSiVtldg-gkL
1hmt   (  46 )    gdiLtlkThst-fknteisFklgvefdetT--addrkVkSiVtldg-gkL
1fdqa  (  46 )    gdkVVirTlst-fknteisFqlgeefdEtT--ADdrnCkSvVsldg-dkL
1pmpa  (  46 )    gdiItIrteSp-fknteisFklgqefeett--AdnrkTkStVtlar-gsL
1lif   (  46 )    gdlVtIrsest-fknteisFklgvefdeiT--addrkVkSiItldg-gaL
1b56   (  49 )    gknLtIktest-lkttqfsctlgekfeetT--aDgrkTqTvCnftd-gaL
1ftpa  (  48 )    gdkFkLtskta-iknteftFklgeefdeet--ldgrkvkStItqdgpnkL
1cbia  (  47 )    gdqFyIktstt-vrtteinFkVgegfeeeT--vdgrkCrSlPtwenenkI
1cbs   (  47 )    gdtFyIktsTt-vrtteinFkVgeefeeqT--vdgrpCkSlVkwesenkM
1crb   (  46 )    gdhMiIrTlst-frnyiMdFqvgkefeEdLtgIddrkCmTtVswdg-dkL
1opba  (  46 )    gdnFkTkTnst-frnydldFtvgvefdEhTkgldgrnVkTlVtweg-ntL
1ggla  (  46 )    gnhMtvrtlst-frnytvqFdvgvefeEdlrsvDgrkCqTiVtwee-ehL
1mdc   (  45 )    gdsysntstggg-gaktvsFksgvefddvi--gagdsVkSmYtVdg-nvV
                    bbbbbbb      bbbbb     bbbb       bbbbbbbbb   bb

                           110       120       130       140     
1lfo   (  92 )    vTtFk-------gIkSvTeFng-dtItNtMtlg--divYkRvSkri 
1eioa  (  91 )    VVnsp-------nYhHtAeivd-gkLvEvStVg--gvsyeRvSkkla
3ifba  (  90 )    iGkFkRtd-ngneLntvReiig-deLvQtyvye--gveAkRiFkkd 
1ifc   (  90 )    vGkFkrvd-ngkeLiAvreisg-neLiQtytYe--gveAkRIFkke 
1bwya  (  92 )    vhvQkwn---gqeTslvremvd-gkLiLtLthg--tavCtrtYekqa
1hmt   (  92 )    vHlQkwd---gqeTtlvRelid-gkLiLtLthg--tavCtRtYeke 
1fdqa  (  92 )    vHiQkwd---gkeTnFvReikd-gkMvMtLtfg--dvvAvRhYeka 
1pmpa  (  92 )    nQvQkwn---gneTtIkRklvd-gkMvVeCkMk--dvvCtRiYekv 
1lif   (  92 )    vQvQkwd---gksTtIkRkrdg-dkLvVeCvMk--gvtStRvYera 
1b56   (  95 )    vQhQewd---gkeStItRklkd-gkLvVeÇvMn--nvtÇtRiYekve
1ftpa  (  95 )    vHeqkgd----hpTiiireFsk-eqCvitiklg--dlvAtriYkaq 
1cbia  (  94 )    hCtQtllegdgpkTyWtreLan-deLiltfGAd--dvvCtriYvre 
1cbs   (  94 )    vCeQkllkgegpktswtreltndgeLiLtmtAd--dvvCtRvYvre 
1crb   (  94 )    qCvQkgek---egRgWtQwieg-deLhLeMrAe--gvtCkQvFkkvh
1opba  (  94 )    vCvQkgek---enRgWkQwveg-dkLyLeLtCg--dqvCrQvFkkk 
1ggla  (  94 )    vCvQkgeV---pnRgwrhwLeg-emLyLeltAr--davCeQvFrkvh
1mdc   (  91 )    tHvVkgd---agvAtFkKeYng-ddLvVtItSsnwdgvArRyYka  
                  bbbbb        bbbbbbbb   bbbbbbbb    bbbbbbbbb  


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