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Align your sequence(s)

serine proteinase -- bacterial

class : all beta number of structures : 5 average size : 188 average PID : 52 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
2sfa rasmol 1 - 191 - serine proteinase Streptomyces fradiae 1.60 18.2
2sga rasmol 16 - 242 - proteinase A Streptomyces griseus 1.50 12.60
3sgb rasmol 16 E 242 E proteinase B Streptomyces griseus 1.80 12.50
1hpg rasmol 16 A 242 A glutamic acid-specific protease Streptomyces griseus 1.50 18.1
2alp rasmol 15A - 245 - alpha-lytic proteinase Lysobacter enzymogenes 1.70 13.10
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
SMART : Tryp_SPc  
PFAM : trypsin  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
2sfa   (   1 )      iAGGeaIyAagggSLGFNVrsssgatyALTAGhÇTeiastWytnsg
2sga   (  16 )      iAGGeaItt-ggsrçSLGFNVsvn-gvahALTAGhÇTnisasWs----
3sgbe  (  16 )      isGGdaIySs-tgSLGFNVrsg-styyFLTAGhÇTdgattWwansa
1hpga  (  16 )      vlGGgaIygg-gsrçSAAFNVtkg-garyFVTAGhÇTnisanWsassg
2alp   (  15A)    anIvGGieYsInnaslÇSVGFSVtrg-atkGFVTAGhÇgtvnAtArig--
                         bbbb    bbb  bbbbb   bbbbbb aaaa    bbb    

                           60        70        80        90        100 
2sfa   (  49 )    qtslLGtragtsFpgnDYGLIrHsnasa-AdgrVylyngsyrdItgagnA
2sga   (  85 )    ----igtrtgtsfpnnDyGIIrHsnpaa-AdgrVylyngsyqdIttagnA
3sgbe  (  81 )    rttvLGttsgssfpnnDyGIVrYtnttipkdgtVg-----gqdItsaanA
1hpga  (  81 )    g-svvGvregtsfptnDyGIVrYtdg-sspaGtVdlyngstqdIssaanA
2alp   (  81 )    -gavVgtFaarvFpgnDrAWVsLt-saQtllprVang-ssfvtVrgstea
                     bbbbbbbbb     bbbbbb         bbb     bbb  bb   

                           110       120       130       140       150 
2sfa   (  98 )    yvgqtVqRSGSttglhsgrVtglnatvnygggdiVsgLIqTnVçAepgDs
2sga   ( 131 )    fvgqaVqRSGSttglrsgsVtglnatvnygssgiVygMIqTnVçaqpgDs
3sgbe  ( 131 )    tvgmaVtRrGsttgthsgsVtalnatvnygggdvVygMIrTnVçaepgDs
1hpga  ( 131 )    vvgqaIkKSGSttkvtsgtVtavnvtvnyg-dgpVynMVrTtAçSaggDs
2alp   ( 131 )    avgaaVçRSGrttgyqçgtItaknvtanya-egaVrgLTqGnAÇMGrgDs
                      bbbbbb   bbbbbbbbbbbbbbb     bbbbbbbb         

                           160       170       180       190       200 
2sfa   ( 148 )    GGALFag-stALGLTSggs-----gnçrtg---gtTfFQpVteAlsaygV
2sga   ( 196 )    GGSLFag-stALGLTSgGs-----gnÇrtg---gtTfYQpVteAlsaygA
3sgbe  ( 196 )    GGPLysg-trAIGLTSggs-----gnçssg---gtTfFQpVteAlvaygV
1hpga  ( 196 )    GGAHFag-svALGIHSgss-----gçsgta---GsAIHQPVteAlsaygV
2alp   ( 196 )    GGSWItsaGqAQGVMSggnvqsngnNçgipasqrsSlFErLqpIlsqygL
                    bbbb   bbbbbbbbb                 bbbbbaaaaaaaa  

                       
2sfa   ( 189 )    sIl  
2sga   ( 240 )    tVl  
3sgbe  ( 240 )    svy  
1hpga  ( 240 )    tVy  
2alp   ( 241 )    sLvtg
                  bb   


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