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Align your sequence(s)

actin/heat-shock cognate

class : alpha beta number of structures : 4 average size : 377 average PID : 40 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1atn rasmol 1 A 372 A actin Oryctolagus cuniculus 2.80 21.0
3hsc rasmol 3 - 384 - heat shock cognate 71 kd protein Bos taurus 1.90 21.00
1hjo rasmol 3 A 382 A heat shock 70 kd protein 1 Homo sapiens 2.30 20.3
1dkg rasmol 3 D 383 D nucleotide exchange factor grpE Escherichia coli 2.80 22.3
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : actin  HSP70  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1atna  (   1 )    dedettALVCdNgSglVkAGfA--gddaPr------avFpSIVGrprhqg
3hsc   (   3 )       kgpAVGIDlGTtySCVGVfqhgkVeIIaNdqgnrtTPsyVAFt-d--
1hjoa  (   3 )       kaaAIGIDlgTtySCVGVfqhgkVeiIaNdqgnrtTPsyVAFt----
1dkgd  (   3 )         kiIGIdlgttnSCVAimdgttprVLeNaegdrtTpsiIAytqd--
                         bbbb    bbbbbbbb  bbbb         bb  bbb     

                           60        70        80        90        100 
1atna  (  43 )    vmvgmgqkdsyvGdeAqskrgiL---tlkyP--Ie--------------h
3hsc   (  47 )    -------terliGdaAknqvamnptnTVfdakrLIgrrfddavVqsdmkh
1hjoa  (  46 )    ------dterliGdaAknqvalnpqnTVfdakrLIgrkfgdpvVqsdmkh
1dkgd  (  46 )    -------getlvGqpAkrqavtnpqnTLfaIkrLIgrrfqdeeVqrdvsi
                           bbb aaaa      333bb             aaaaaa   

                           110       120       130       140       150 
1atna  (  74 )    giit-----------------------nwdDMekIWhhTFyneLrvaPee
3hsc   (  90 )    WpFmVvnda-grPkVqVeykgetksfyPeeVssmVLtkMkeIAeaylgkt
1hjoa  (  90 )    WpFqVindg-dkPkVqVsykgetkafyPeeISsmVLtkMkeiAeayLgyp
1dkgd  (  89 )    MpFkIiaAdngdAwVeV--kg--qkmaPpqIsAeVLkkMkktAedylgep
                     bbbb     bbbbb      bbb aaaaaaaaaaaaaaaaaaaa   

                           160       170       180       190       200 
1atna  ( 101 )    h-PTLLTeAPlNpkanrekMTqIMFetFnVpaMyVaiqAvLSLyAsg---
3hsc   ( 139 )    VtnAVVTVPAyFndsQrqaTkdAGti-AgLnVlriinEptAAAiAygldk
1hjoa  ( 139 )    VtnAVITVPAyFndsQrqaTkdAGvi-AgLnVlriinePtAAAIAygldr
1dkgd  ( 135 )    VteAVITVPAyFndaQrqaTkdAGri-AgLeVkriineptAAAlAYgLdk
                    bbbbbb     aaaaaaaaaaaaa    bbbbbbbaaaaaaaa     

                           210       220       230       240       250 
1atna  ( 147 )    ----rttGIVLdSgdGvTHNVPIye-----gyal-phAImrld-LAgrdL
3hsc   ( 188 )    kvgaernVLIFDLGGgTFdVSILTIedg-ifevks---taGdthlGGedF
1hjoa  ( 188 )    tgkgernVLIFdLGGGtFdVSILTIddg-ifevka---taGdthlGGedF
1dkgd  ( 185 )      tgnrTIAVYdLggGtFdISIIeIdek tfevla---tnGdthLGgedF
                       bbbbbbbb    bbbbbbbbb     bbbb   bbbb    aaaa

                           260       270       280       290       300 
1atna  ( 186 )    TdyLmkILter-----gysFv-----ttaereiVrdIkeklCyValdFen
3hsc   ( 234 )    DnrMVnhFiaeFkrkhkkdIsenkrAvrrLrtaCerAKrtLss-------
1hjoa  ( 234 )    DnrLVnhFveeFkrkhakdIsqnkrAvrrLrtaCerAKrtLss-------
1dkgd  ( 233 )    dsrLinyLVeeFkkdqgidLrndplAmqrLkeaAekAkieLss-------
                  aaaaaaaaaaaaaaa        aaaaaaaaaaaaaaaaa          

                           310       320       330       340       350 
1atna  ( 226 )    emataassssleksyeLpdg---------qvItIGn-ErFrCPeTLFqPs
3hsc   ( 277 )    ---------stqasIeidsLye----gidFytsItrarFeelNadlFr--
1hjoa  ( 277 )    ---------stqasLeIdsLfeg----idFytsItrarFeelCsdlFr--
1dkgd  ( 276 )    ---------aqqtdVnlpyItadatgpkhMnikVtrakLeslVedLVn--
                             bbbbbbbbbb      bbbbbbbbaaaaaaa aaaaa  

                           360       370       380       390       400 
1atna  ( 266 )    figmesaGIhetTynSImkCdidirkdLYanNVMSggTTmYpgIadrMqk
3hsc   ( 312 )    -------gTldpVekAlrdAk--ldksqIhdIVLVGGSTrIpkIqklLqd
1hjoa  ( 312 )    -------sTlepVekAlrdAk--ldkaqIhdLVlVGGSTrIpkVqklLqd
1dkgd  ( 315 )    -------rSielLkvALqdAg--lsvsdIddVILvggqTrMpMVqkkVae
                         a aaaaaaaaa            bbbbb 3333 aaaaaaaaa

                           410       420       430       440       450 
1atna  ( 316 )    eItalApstmkIkIiapperkySvWiGGSilAslstFqqmWitkqeydea
3hsc   ( 353 )    fFn-------gkeLnksinPdEAVAyGAAvqAAilsgdk           
1hjoa  ( 353 )    fFn-------grdlnksinpdeAVAyGAAvqAailmg             
1dkgd  ( 356 )    fFg--------kePrkdvnPdeAvAiGAAvqGgvlt              
                  a                     aaaaaaaaaaa                 

                         
1atna  ( 366 )    gpsiVhr
3hsc                     
1hjoa                    
1dkgd                    
                         


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