|
|
| class : alpha beta | number of structures : 4 | average size : 285 | average PID : 30 % |
| PDB code |
start residue |
start chain |
end residue |
end chain |
name | source | resolution | R-factor |
|---|---|---|---|---|---|---|---|---|
1d9x
![]() |
2 | A | 414 | A | deoxyribonucleic acid repair protein uvrB | Bacillus caldotenax | 2.60 | 25.6 |
1c4o
![]() |
2 | A | 409 | A | excinuclease ABC subunit B | Thermus aquaticus | 1.50 | 25.2 |
1hv8
![]() |
3 | A | 210 | A | probable ATP-dependent RNA helicase mj0669 | Methanococcus jannaschii | 3.00 | 27 |
1qde
![]() |
12 | A | 222 | A | eukaryotic initiation factor 4a | Saccharomyces cerevisiae | 2.00 | 21.4 |
| pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol) | ||||||||
| external links |
| |
| other info | key to JOY annotation | show related PDB structures | |
| alignment | show WITH Pfam family sequences |
10 20 30 40 50
1d9xa ( 2 ) egrFqlvApyepqgdqpqAiakLVdGLrr
1c4oa ( 2 ) tFrYrgp-spkgdQpkAiagLveALrd
1hv8a ( 3 ) veynFneLnLsdnIlnaIrnkgfekPtdIQ-kVIplFLn----
1qdea ( 12 ) iqtnydkvvykFddMeLdenLlrGVfgygfeePsaiQqrAImPIie----
aaaaaaaaaa
60 70 80 90 100
1d9xa ( 31 ) gvkhQTLlGatgTgktFTiSnVIaqvn------kPTLVIAhnktlAgqly
1c4oa ( 28 ) gerfVTLlGatgTgktvTMAkVIeaLg------rPALVLAPnkilAaqLA
1hv8a ( 43 ) deynIVAqArtgsgktASFAIPLIelVnenn-gIEAIILTPtrelAiqVA
1qdea ( 58 ) g-hdVLAqaqsgtgKtGTFSIAALqrIdtsvkaPQALMLAPtrelAlqIq
bbbbb aaaaaaaaaaaa bbbb aaaaaaaa
110 120 130 140 150
1d9xa ( 75 ) seLkefFphNaVeyFVsyydyyqpeaYvpqtdtyiekdakindeidklrH
1c4oa ( 72 ) aeFrelFpeNaVeyFiSyydyyqpeaYvpgkdlyiekdasinpeierlrh
1hv8a ( 92 ) deIesLkgnknLkIAkIygg----------------------kaiypqik
1qdea ( 107 ) kvVmaLAfhmdIkVhACi--------------------------------
aaaaaa bb aaaaaa
160 170 180 190 200
1d9xa ( 125 ) sATsaLferrDVIIVASVSCIygLgspeeYrelvVslrvgmeiernallr
1c4oa ( 122 ) sTTrsLltrrdVIVVAsVsAIyGLgdpreYrarnlvg-------------
1hv8a ( 120 ) aLk------nANIVVGtPgrIl------dhinr-----------------
1qdea ( 135 ) glr------dAQIVVGTPgrVf------dNiqr-----------------
aaa bbbb aaaa
210 220 230 240 250
1d9xa ( 175 ) rlvdIqydrndifrgtfrvrgdvveifpasrdehcirveffgdeieaEvd
1c4oa ( 237 ) --------------------------------------------------
1hv8a ( 141 ) --------------------------------------------------
1qdea ( 156 ) --------------------------------------------------
260 270 280 290 300
1d9xa ( 229 ) altgkvlgerehvaIFPashfvtreekmrlAIqnIeqeLeerLaelraqg
1c4oa ( 237 ) ------------fvlfpatHylspe-gleeILkeIekeLwervryFeerg
1hv8a ( 141 ) --------------------------------------------------
1qdea ( 156 ) --------------------------------------------------
310 320 330 340 350
1d9xa ( 279 ) klleAqrLeqrTryDLemMremgfCsGienYsrhLalrppgstpyTLLdY
1c4oa ( 274 ) evlyAqrLkerTlydLemLrvmgtCpGvenYaryFtgkapgeppyTLLdY
1hv8a ( 141 ) ----------------------------------------------gtLn
1qdea ( 156 ) ----------------------------------------------rrFr
360 370 380 390 400
1d9xa ( 329 ) FpddFLIIVdeShvTLpqLrgmyngdrarkqvLvdhGfRLpSAldnrPLt
1c4oa ( 324 ) FpedFLVFLdeShvTVpqLqgmyrgdyarkktLVdyGFrLpSAldNRPLr
1hv8a ( 145 ) LknVkyFILDeAdeln--------gfikdVekILn--aCnk---------
1qdea ( 160 ) tdkIkMFILDeAdeMLss------gfkeqIyqIFt--lLpp---------
bbbbb aaaaaa aaaaaaaaa
410 420 430 440
1d9xa ( 379 ) FeeFeqkInqIIYVSatPgpyElehSp------gvveQiirp
1c4oa ( 374 ) feeFlerVsqVVFVSatPgpfElahSg------rvveQiirp
1hv8a ( 178 ) -------dkrILLFSat-preIlnLAkky-gdysfikaki
1qdea ( 193 ) -------tTqVVLLSatmpndVleVTtkfMrnpvrIl
bbbbb aaaaaa bbbb
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