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Align your sequence(s)

lactate/malate dehydrogenase

class : alpha beta number of structures : 14 average size : 319 average PID : 32 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1mld rasmol 1 A 313 A malate dehydrogenase, mitochondrial Sus scrofa 1.90 21.1
2cmd rasmol 1 - 312 - malate dehydrogenase Escherichia coli 1.90 18.8
1ldn rasmol 15 A 330 A L-lactate dehydrogenase Bacillus stearothermophilus 2.50 15.7
1llc rasmol 13 - 334 - L-lactate dehydrogenase Lactobacillus casei 3.00 37.4
1lld rasmol 7 A 319 A L-lactate dehydrogenase Brevibacterium longum 1.50 17.9
9ldb rasmol 1 A 331 A L-lactate dehydrogenase M chain Sus scrofa 2.20 22.0
1ldm rasmol 1 - 329 - L-lactate dehydrogenase M chain Squalus acanthias 2.10 N/A
5ldh rasmol 1 - 331 - L-lactate dehydrogenase H chain Sus scrofa 2.70 16.6
2ldx rasmol 1 - 331 - L-lactate dehydrogenase X chain Mus musculus 3.00 25.6
1hlp rasmol 21 A 328 A malate dehydrogenase Haloarcula marismortui 3.20 18.2
4mdh rasmol 1 A 333 A malate dehydrogenase, cytoplasmic Sus scrofa 2.50 16.7
1bdm rasmol 0 A 332 A malate dehydrogenase mutant with Thr 189 replaced by Ile (t189i) Thermus flavus, strain f428 1.80 16.9
1ceq rasmol 19 A 329 A L-lactate dehydrogenase Plasmodium falciparum 1.00 19.0
1a5z rasmol 22 - 333 - L-lactate dehydrogenase Thermotoga maritima 2.10 20.0
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : UDPG_MGDP_dh_N  ldh_C  ldh  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1mlda  (   1 )                        akVAVLgAsggiGqpLSllLKn-sp----l
2cmd   (   1 )                        mkVAVLGAaggiGqaLAllLKtqLp----s
1ldna  (  15 )                  mknnggaRVVVIGA-gfVGasYVfaLMnqG-----I
1llc   (  13 )    a---------sitdk---dhqkVILVgD-gavGssYAfaMVlqg-----i
1llda  (   7 )                       ptkLAVIGA-GaVGstLAfaAAqrg-----I
9ldba  (   1 )    atlkdqlihnl-lkeehvphnKITVVGV-GaVGmACAisILmke-----L
1ldm   (   1 )    atlkdklighlatsqeprsynkITVVGV-gaVGmACAisILmkd-----L
5ldh   (   1 )    atlkekliapvaqqettipdnKiTvvGV-gqVGmAcaisilgks-----L
2ldx   (   1 )    stvkeqliqnlvpedkls-rckITVVgV-gdVGmACAisILlkg-----L
1hlpa  (  21 )                        tkVSVVGAAGtVGaaAGynIAlrd-----i
4mdha  (   1 )                     sepirVLVTGAAgqIAysLLysIGnGsVFgkdq
1bdma  (   0 )                    mkapvrVAVTGAAgqIGysLLfrIAaGeMLgkdq
1ceqa  (  19 )                      pkakIVLVgS-gmiGgvMAtlIVqkn-----L
1a5z   (  22 )                        mkIGIVGL-grVGssTAfaLLmkg-----F
                                       bbbbb    aaaaaaaaaaaa        

                           60        70        80        90        100 
1mlda  (  26 )    VsrLTLYdia----hTpgvaadlshi--etrAtVkGylgpeqlpdCLkgC
2cmd   (  27 )    gSeLSLYdiap---vTpgvAvdlshi--ptaVkIkGfsg-edAtpALegA
1ldna  (  45 )    AdEIVLiDa--neskAigdamdfnhgkvfApkpVdIwhg---dyddCrdA
1llc   (  46 )    AqeIGIvdi--fkdkTkgdaidlsnalpft-spKkIysA---eysdAkdA
1llda  (  32 )    AreIvLEDi--akerVeaevldmqhgssfyp-tVsIdGsd--dpeiCrdA
9ldba  (  46 )    AdeIALVDv--medkLkgemmdlqhgslflrTp-kIvSgk--dYnvTanS
1ldm   (  45 )    AdeVALVDv--medkLkgemmdlqhgslflhTa-kIvSgk--dysvSagS
5ldh   (  46 )    TdeLALvDv--ledkLkgemmdlqhgslflqtp-kivank--dysvTanS
2ldx   (  44 )    AdeLALVda--dtdkLrgealdlqhgslflsTp-kIvfgk--dynvSanS
1hlpa  (  45 )    AdeVVFVDipdkeddTvgqAadtnhgIaydSn--tRvrqg--gyedTagS
4mdha  (  34 )    pIiLVLLDitpmmgvLdgvlmelqdc--aLplLkdviaTd-keeiAFkdL
1bdma  (  34 )    pViLQLLEipqamkaLegvvmeLedc--afpllagleatd-dpdvAFkdA
1ceqa  (  46 )    G-dVvLFdi--vknmPhgkAldtshtnvmaySnCkVsGSn--tyddLagS
1a5z   (  46 )    AreMVLIDv--dkkrAegdAldlihgtpft-rrAnIyAG---dyadLkgS
                    bbbbb      aaaaaaaaaaa          bbbb            

                           110       120       130       140       150 
1mlda  (  70 )    dVVVIPagvpRkpgmtrddLfntNAtiVatlTaaCAqhc-pdAMICIISn
2cmd   (  71 )    dVVLISagvrRkpgmdRsdLfnvNAgiVknLVqqVAktc-pkACIGIITn
1ldna  (  90 )    dLVVICAGanQkpgetrldLVdkNIaiFrsIVesVmaSg-FqgLFLVATN
1llc   (  92 )    dLVVITagapkqpgeTrldLVnkNlkiLksiVdpIvdsg-FnLIFLVAAn
1llda  (  77 )    dMVVITAGprqkpgqsrlelVgaTvniLkaiMpnLvkVA-pnAIYMLITn
9ldba  (  92 )    rLVVITAGarQqegesrlnLvqrNvniFkfIIpnIvkyS-pnCKLLVVSN
1ldm   (  90 )    kLVVITAGarQqegesRlnLvqrNVniFkfIIpnIvkhS-pdCIILVVSN
5ldh   (  92 )    kIVvVTAgvrqqegesrlnlvqrnvnvFkfIipqivkys-pnCIIIVVSN
2ldx   (  89 )    kLVIITaGarmvsgqtrldLLqrNvaiMkaiVpgViqnS-pdCKIIVVTn
1hlpa  (  90 )    dVVVITAGiprqpgqtridlAgdNapiMedIQssLdehn-ddYiSLTTSn
4mdha  (  81 )    dVAILVGSmprrdgMerkdllkaNVkiFkcqGaALdkyAkksVkVIVVGn
1bdma  (  81 )    dyALLVGAAp          lqvnGkiFteQGraLAevAkkdVkVLVVGn
1ceqa  (  92 )    dVVIVtaGft     nrddlLplNnkiMieIGghIkknC-pnAFIIVvTn
1a5z   (  92 )    dVVIVAAGvpqkpgEtrlqlLgrNArvMkeIArnVskyA-pdSIVIVVTn
                   bbbb               aaaaaaaaaaaaaaaaaa     bbbb   

                           160       170       180       190       200 
1mlda  ( 119 )    PVNSTIPITAEvFkkhgvynpnkIFGV-TTLDivrAnafVAelkgldpar
2cmd   ( 120 )    pVNTTVAIAAEVLkkagvydknkLFGV-tTLDIirSntfVAelkgkqpge
1ldna  ( 139 )    PVDILTYATwkfS----glpherVIGSGTiLDtarFrflLGeyfsvapqn
1llc   ( 141 )    PVDILTyATwklS----gfpknrVVGsGTslDTarFRqsIAemvnvdars
1llda  ( 126 )    pVDIATHVAqklT----glpenqIFGSGTNlDSarLrflIAqqTgvnvkn
9ldba  ( 141 )    PVDILTyVAwkiS----gFpknrVIGSGCnLDsarFrylMGerlgvhpls
1ldm   ( 139 )    PVDVLTYVAwklS----glpmhrIIGSGCnLDsarFrylMGerlgvhscs
5ldh   ( 141 )    pVdILTyvawkls----glpkhrVIGSGCnLdsarfrylmgeklgvhpss
2ldx   ( 138 )    PVDILTyvVwkiS----gfpvgrVIGSGCnldsarFrylIGeklgvnpts
1hlpa  ( 139 )    PVDLLNRHLyeag----drsreqVIGFGgrLdsarFryVLseefdApvqn
4mdha  ( 131 )    pANtNCLTASksAp---sIpkenFSCL-TrLDHnrAkaqIalklgvtsdd
1bdma  ( 131 )    pANTNALIAyknAp---gLnprnFTAM-TRLDHnrAkaqLakktgtgvdr
1ceqa  ( 141 )    pVDVMVQlLhqhS----gVpknkIIGLgGvLDTsrLkyyISqkLnvcprd
1a5z   ( 141 )    pVDVLTyFFlkeS----gmdprkVFGsGTvlDtarLrtLIAqhÇgfsprs
                   aaaaaaaaaaaa          bbb   aaaaaaaaaaaaaaa   333

                           210       220       230       240       250 
1mlda  ( 168 )    Vs-VpVIGGHagkTIIPLIsqCt----pk-VdFp------------qdql
2cmd   ( 169 )    Ve-VpVIGGHsgvTILPLLsqV-----pg-VsFt------------eqev
1ldna  ( 185 )    Vh-AyIIGEHgd-tELpVwsqAyigv----mpIrklVes--kgeeAqkdL
1llc   ( 187 )    Vh-AyIMGEhgd-tEFPVwshAnigg----vtiaewvka--hpeikedkl
1llda  ( 172 )    Vh-AyIAGeHgd-sEvpLwesAtIgg----vpMsdwtplpghdpLdadkr
9ldba  ( 187 )    Ch-GwILGeHgd-sSVpVWsgVnvag----vslknl-hpeLGtdadkehw
1ldm   ( 185 )    Ch-GwVIGEHgd-sVPSVWSgMnvas----iklhpl-dgtNkd---kqdw
5ldh   ( 187 )    Ch-gwiLgeHGd-ssvAvwsgvnvagv---vlqqln-pemgtd-ndsenw
2ldx   ( 184 )    Ch-GwVLGEhgd-sSVpiWsgVnvagv-tlkslnpa-igtDkn---kqhw
1hlpa  ( 185 )    Ve-GtILGEhgd-aqVPVFskVrVdg----tdPefSg----------dek
4mdha  ( 177 )    VknVIIWGNhss-tQYPDVnhAkVklqakevgVyeAVk-------ddswL
1bdma  ( 177 )    IrrMTVWGnhss-iMFPDLfhAeVdg----rpAlelV--------dmewY
1ceqa  ( 187 )    Vn-AhIVGahgn-kMVlLkryItVgg----ipLqefinnk---lIsdaeL
1a5z   ( 187 )    Vh-VyVIGehgd-sEVpVwsgAmIgg----ipLqnqv--çqkÇdskil
                       bb        bb                                a

                           260       270       280       290       300 
1mlda  ( 200 )    s-tLtgrIqeaGtevVkakagagSAtlsMAyAGArFVfsLVdAmngkegv
2cmd   ( 200 )    a-dLTkrIqnAGtevVeakagggSAtlsMGqAAArFGlSLVrAlqgeqgV
1ldna  ( 227 )    e-rifvnVrdaAyqiIekk---gATyygIAmgLArVTrAILhne----na
1llc   ( 226 )    v-kmfedVrdaayeiiklk---gatfygiAtaLArISkAILnde----na
1llda  ( 216 )    e-eiHqeVknaaykiingk---gatnyaIGmsGVdIIeAVLhdt----nr
9ldba  ( 226 )    k-aVhkeVvdsAyeviklk---gytSwaIGlsVAdLAeSIMknl----rr
1ldm   ( 225 )    k-kLhkdVvdsAyevIklk---gyTSwaIGlsVAdLAeTIMknl----cr
5ldh   ( 226 )    k-evhkmvvesayeviklk---gytNwaIGlsvadLieSMlknl----sr
2ldx   ( 227 )    k-nVhkqVveggyevLdmk---gytSwaIGlsVtdLArSIlknl----kr
1hlpa  ( 225 )    e-qllgdLqesamdvierk---gatewgPArGVAhMVeAIlhdt----ge
4mdha  ( 219 )    kgeFIttVqqrgaavIkark--lsSamsAAkAIcdHVrdiwfgTp--ege
1bdma  ( 219 )    ekvFiptVaqrgaaiiqarg--assaasAAnAAIeHIrdWalgTp--egd
1ceqa  ( 226 )    e-aifdrTvnTaleivnlh---aspyvaPAaaIIeMAeSylkdl----kk
1a5z   ( 226 )    e-nFaekTkraayeiierk---gathyaiAlaVAdIVeSIffde----kr
                  a aaaaaaaaaaaaaaa         aaaaaaaaaaaaaaa         

                           310       320       330       340       350 
1mlda  ( 249 )    vecSFVkSqet-----dCpYFSTpLlLgkkGieknlgigkispfEekmia
2cmd   ( 249 )    vEcAYVegdgq-----yArFFSqpLlLgknGVeerksigtlsafEqnaLe
1ldna  ( 269 )    ilTVSAyLdgl-YgE-rdVYIGVPAVInrnGIreviei-eLnddEknrFh
1llc   ( 268 )    vLPLSVyMdgq-ygi-ndLYIGTPAvInrnGIqnilei-pLtdheeesMq
1llda  ( 258 )    ilPVSSMLkdf-hgI-sdICMSVPTlLnrqGVnntint-pVsdkelaaLk
9ldba  ( 268 )    vHPISTmIkgl-ygIkenVFLSVPCiLgqnGIsdvvkv-tLtpeEeahLk
1ldm   ( 267 )    vHPVSTmVkdf-ygIkdnVFLSLPCvLndhGIsnivkm-kLkpnEeqqLq
5ldh   ( 268 )    ihPVSTmVqgm-ygieneVfLSLpCvLnarGLtsVinq-klkddevaqLk
2ldx   ( 269 )    vHpVTTlVkgf-hgIkeeVFLSiPCvLGesGItdfvkv-nmtaeEeglLk
1hlpa  ( 267 )    vlPASVkLege-fgh-edTAFgVPVrLGsnGVeeivew-dLddyEqdlMa
4mdha  ( 265 )    fVSMGIiSdgNsYgVpddLLYSFPVtIkdktw-kiveglpindfSrekMd
1bdma  ( 265 )    WVSMAVPSqge-ygIpegIVYSFPVtAkdgaY-rVvegleinefArkrMe
1ceqa  ( 268 )    vliCSTlLegq-Ygh-sdIFGgTPVvLGanGVeqviel-qLnseekakFd
1a5z   ( 268 )    vlTLSVyLedY-lgV-kdLCISVPVtLGkhGVerilel-nLneeeleaFr
                  bbbbbbb            bbbbbbbbb  bbbbb       aaaaaaaa

                           360       370 
1mlda  ( 294 )    eAipeLkasIkkGeefv-knm
2cmd   ( 294 )    gMldtLkkdIalGqefV-nk 
1ldna  ( 316 )    hSAatLksvlaraft      
1llc   ( 317 )    kSAsqLkkVLtdafak---nd
1llda  ( 305 )    rsaetLketAaq-fgf     
9ldba  ( 317 )    kSAdtLwgiQkeL-qf     
1ldm   ( 315 )    kSAttLwdiQkdL-kf     
5ldh   ( 317 )    nsadtlwgiqkdlkdl     
2ldx   ( 317 )    kSAdtLwnmQknl-el     
1hlpa  ( 315 )    dAAekLsdqydkis       
4mdha  ( 314 )    lTAkeLaeeketafef-Lssa
1bdma  ( 314 )    iTAqeLldemeqVkalgli  
1ceqa  ( 317 )    eAIaeTkrmkalA        
1a5z   ( 317 )    kSAsiLknaIneItae---en
                  aaaaaaaaaaaa         


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