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Align your sequence(s)

Asp/Glu/Hydontoin racemase domain

class : alpha beta number of structures : 4 average size : 109 average PID : 18 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1jfl rasmol 1 A 115 A Aspartate racemase Pyrococcus horikoshii 1.90 19.4
1b74 rasmol 1 A 105 A Glutamate racemase Aquifex pyrophilus 2.30 22.1
1jfl rasmol 116 A 226 A Aspartate racemase Pyrococcus horikoshii 1.90 19.4
1b74 rasmol 106 A 213 A Glutamate racemase Aquifex pyrophilus 2.30 22.1
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Asp_Glu_race  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                            10        20        30        40        50  
1jfla1  (   1 )    mktiGILGGMgplaTaelfrriviktpAkrdqehpkViifn---npqIpd
1b74a1  (   1 )     mkiGIFds-g-vgGltvlkairnryr------kvdIvylg---dtarvp
1jfla2  ( 116 )    fkkAGLLAttgtivsgvyekefsky--------gveImtPtedeqkdVmr
1b74a2  ( 106 )    nkkiGVIGtpatvksgayqrkleeg--------gadVfAkaCPlfaplae
                     bbbbbb   aaaa aaaaaaaa           bbbbbb         

                            60        70        80        90        100 
1jfla1  (  48 )    rta--yilgkgedPrpqLiwTAkrLeecgAdfIiMPcntAHa-fvedIrk
1b74a1  (  39 )    Ygi--r---skdtIIrySleCAgfLkdkgVdiIvVAcntASayAlerLkk
1jfla2  ( 158 )    GIyeGvkagnlklGreLLlkTAkiLeergAeCIIAGcteVsvVLk---qd
1b74a2  ( 148 )    eglLe-----geiTrkvVehyLkeFk-gkIdtLilgcthyPL-lkkeIkk
                                aaaaaaaaaaaaa     bbbb         aaaaaa

                            110       120 
1jfla1  (  95 )    aI-kipIiSmieetakkvkelg 
1b74a1  (  84 )    eI-nvpVfGviepgvkealkksr
1jfla2  ( 205 )    dL-kvplidpmdviaevavkval
1b74a2  ( 191 )    fLgdaevvdssealslslhnfik
                   a     bb aaaaaaaaaaa   


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