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Align your sequence(s)

zinc finger -- CCHH-type

class : small number of structures : 15 average size : 29 average PID : 35 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1zaa rasmol 3 C 33 C zinc-finger (ZIF268, domain 1) Mus musculus 2.10 18.20
1zaa rasmol 34 C 61 C zinc-finger (ZIF268, domain 2) Mus musculus 2.10 18.20
1zaa rasmol 62 C 87 C zinc-finger (ZIF268, domain 3) Mus musculus 2.10 18.20
1ard rasmol 102 - 130 - zinc-finger (transcription factor ADR1) Saccharomyces cerevisiae N/A N/A
1znf rasmol 1 - 25 - zinc-finger (XFIN, 31st domain) Xenopus laevis N/A N/A
2drp rasmol 137 A 165 A zinc-finger (tramtrack, domain 2) Drosophila melanogaster 2.80 19.30
3znf rasmol 1 - 30 - zinc-finger (enhancer binding protein) Homo sapiens N/A N/A
5znf rasmol 1 - 30 - zinc-finger (ZFY-6T) Homo sapiens N/A N/A
1bbo rasmol 1 - 27 - human enhancer-binding protein mbp-1 mutant with cys 11 replaced by abu (c11abu) (nmr, 60 structures) Synthetic peptide based on the human (homo sapiens) sequence N/A N/A
2drp rasmol 103 A 136 A zinc-finger (tramtrack, domain 1) Drosophila melanogaster 2.80 19.30
1paa rasmol 130 - 159 - zinc-finger (transcription factor adr1 Saccharomyces cerevisiae N/A N/A
1sp1 rasmol 1 - 29 - sp1f3 Homo sapiens N/A N/A
1sp2 rasmol 1 - 31 - sp1f2 Homo sapiens N/A N/A
1zfd rasmol 39 - 70 - swi5 Saccharomyces cerevisiae N/A N/A
1znm rasmol 2 - 28 - yy1 Homo sapiens N/A N/A
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : zf-C2H2  
other info key to JOY annotation | show related PDB structures

                           10        20        30        
1zaa1  (   3 )          rpyaCpvesCdrrfsrsdeltrhi-ri-htgqk
1zaa2  (  34 )           pfqCri--cmrnfsrsdhltthi-rt-htgek
1zaa3  (  62 )           pfaCdi--cgrkfarsderkrht-ki-hlr  
1ard   ( 102 )          rsfvCev--ctrafarqehlkrhy-rs-htnek
1znf   (   1 )            ykCgl--cersfveksalsrHq-rv-hkn  
2drp2  ( 137 )        nvkvypCpf--cfkeftrkdnmtahv-kiihk   
3znf   (   1 )          rpyhCsy--cnfsfktkgnltkhmkskahSkk 
5znf   (   1 )          ktyqCqy--ceyrSadssnlkthiktk-hskek
1bboN  (   1 )           kyiCee--cgirckkpsmlkkhi-rt-htdv 
2drp1  ( 103 )    ftkegehtYrCkv--csrvythisnfcrhy-vtshkr  
1paa   ( 130 )          kayaCgl--cnraftrrdllirhaqki-hsgnl
1sp1   (   1 )          kkfaCpe--cpkrfmrsdhLskhi--kthqnkk
1sp2   (   1 )          rpfmCtwsycgkrftrsdelqrhk--rthtgek
1zfd   (  39 )         drpyscdhpgcdkafvrnhdlirhk-ks-hqeka
1znm   (   2 )            fqCtf  cgkrFsldfnlkthv-ki-htg  
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