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Align your sequence(s)

Prokaryotic molybdopterin oxidoreductases

class : multi domain number of structures : 4 average size : 759 average PID : 39 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1cxs rasmol 1 A 780 A dimethyl sulfoxide reductase (DMSO reductase) Rhodobacter sphaeroides 2.2 17.2
1dmr rasmol 3 - 781 - dimethyl sulfoxide reductase (DMSO reductase) Rhodobacter capsulatus 1.82 14.7
1tmo rasmol 5 - 798 - trimethylamine n-oxide reductase Shewanella massilia 2.5 18.2
1aa6 rasmol 1 - 715 - formate dehydrogenase H Escherichia coli 2.3 21.7
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Molybdop_Fe4S4  Molydop_binding  molybdopterin  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1cxsa  (   1 )    eglangevmSGCHW----GVFkArVengrAvaFepwd---kDpapShQLp
1dmr   (   3 )      langtvmSGSHW----GVFtAtVengrAtaFtpwe---kDphpSpMla
1tmo   (   5 )      nedewlTTGsHF----GAFkMkrkngvIaeVkpFd---lDkyptdMin
1aa6   (   1 )        mkkvvTVcPYcASGcKInLVVdngkIvrAeaAqGkTNqgtLclKGy
                       bbbbbbb      bbbbbbbb   bbbbbb             aa

                           60        70        80        90        100 
1cxsa  (  44 )    GVldsIySp----TRIkyPMVRreFlekgvnAdrstRGngdFvrvtwdeA
1dmr   (  44 )    GVldsIySp----TRIkyPMVRreFlekgvnAdrstRGngdFvrvsWdqA
1tmo   (  46 )    GIrgmVyNp----SRVryPMVRldFllkghkSnthqRGdFrFVrvtwdkA
1aa6   (  47 )    yGwdFIndtqiLTPRLktPMIrrqr-------------gGkLepvswdeA
                  aaaaaa             bbbaaaaaa333  333     bbb  aaaa

                           110       120       130       140       150 
1cxsa  (  90 )    LdlVareLkrVqesygptGTFGGSygWksPGrLHncQvLMrrALnlaggf
1dmr   (  90 )    LdlVAaeVkrVEetygpeGVFGGSygWksPGrLHncTtLLrrMLtlAggy
1tmo   (  92 )    LtlFkhSLdeVQtqygPsGLHAGQtgwraTGqLHssTsHMQRAVgMHGny
1aa6   (  84 )    LnyVAerLsaikekygpdAIQT-TGSSrgtGNE--TNYVMQkFARAVIgT
                  aaaaaaaaaaaaaaa 333bb              aaaaaaaaaaa    

                           160       170       180       190       200 
1cxsa  ( 140 )    VnssgD-ysTaAAqiIMphVMGtlEVyeqQTAWpvVvenTdLMVFWaadP
1dmr   ( 140 )    VnGagd-ySTgAAqvIMphVVGtlEVyeqQTAWpvLaenTeVMVFWaAdP
1tmo   ( 142 )    Vkkigd-ysTgAGqtILpyVLGsteVyaqgtSWplILehSdtIVLWsNdp
1aa6   ( 131 )    NNVDCcarvHgpSvagLhqSVGnG---AMSNaIneIdn-TdLVFVFgYnP
                   bbb        aaaaaaaa            aaaaaaa  bbbbb   a

                           210       220       230       240       250 
1cxsa  ( 189 )    mktNeiGwvIPDHgAyagMkaLkek----gtrVICInpvrteTAdyFgAd
1dmr   ( 189 )    iktSQiGwvIPeHgAYpgLeaLkak----gtkVIVIdpvrtkTvefFgAe
1tmo   ( 191 )    yknLqvGwnAETHeSfayLaqLkekvkqgkIrVISIdpVvtkTqayLgce
1aa6   ( 178 )    adsH--------pIVanhVinAkrn----gAkIIVCdpRkIetAriAd-m
                  aaa           aaaaaaaaaaa      bbbbb     aaaaaa  b

                           260       270       280       290       300 
1cxsa  ( 235 )    vVsPrPQTdvALMLGMAhTLysedlHdkdFLenCTtgfdlFaayLtGesd
1dmr   ( 235 )    hitPkPQTdvAIMLGMAhTLvaedlydkdFianyTsgfdkFlpyLdGetd
1tmo   ( 241 )    qlyVnPQTdvTLMLAIAhEMiskklyddkFIqgySlgfeeFvpyVmGtkd
1aa6   ( 215 )    hIaLknGSnIALLNAMGhVIieenlydkafvasrTegfeeYrkiVe----
                  bb      aaaaaaaaaaaaaa     aaaaaaabb aaaaaaaa     

                           310       320       330       340       350 
1cxsa  ( 285 )    gtpKtAewAaeiCglpaeqIrelArsFvag-rTMLAAGWsIQrmhhGEQA
1dmr   ( 285 )    stpKtAewAegiSgVpaetIkeLArlFesk-rTMLAAGWsMQrmhhGEQA
1tmo   ( 291 )    gvaKtPewAapiCgVeahvIrdlAkTLvkg-rTQFMMGwciQrqqhGEQP
1aa6   ( 261 )    --gytPesVediTgVsaseIrqAArmYAqAksAAILWgmgVTqfyqGveT
                       aaaaaaaa   aaaaaaaaaaaaa   bbbbb  333     aaa

                           360       370       380       390       400 
1cxsa  ( 334 )    HWMLVTLASMIGqIGlpGGgFGLSYhySNGGsptSdGp----aLggIsdg
1dmr   ( 334 )    HWMLVTLASMLGqIGlpGGgFGLSYhySGGGtpsTsGP----aLagItdg
1tmo   ( 340 )    YWMaAVLATMIGqIGlpGGgIsYgHhySSIGVpsSgAa----aPgaFprn
1aa6   ( 309 )    VrSLTSLAMLTGNLGkphAGVNPVRgqNNVqGAcDMGAlPdTYPGyqyVk
                  aaaaaaaaaaa        bbb                            

                           410       420       430       440       450 
1cxsa  ( 380 )    ---------------gwa--tsIpCARVVdMLlnpggefqfngatatYpd
1dmr   ( 380 )    g-aatkgpewl--aasGa--svIpvARVVdMLenpgaefdfngtrskFPd
1tmo   ( 386 )    ldenqkplfdssdfkgas--stIpvARWIdAIlepgktidangskvvYPd
1aa6   ( 359 )    dpanrekFakaWgvesLpahtgyrIseLphrAah--------------ge
                                       bbb333aaaaaa    bbb    bbb   

                           460       470       480       490       500 
1cxsa  ( 425 )    VkLAYWAggnPFAhHQdRnrMlkAWekLeTFIVQdfqWtATArhADIVLP
1dmr   ( 425 )    VkMAYWVggnPFVhHQdRnrMvkaWekLeTFVVHdfqWtPTArHADIVLP
1tmo   ( 434 )    IkMMIFSgnnPWnhHQdRnrMKqAFhkLeCVVTVdvnWtaTCRFSDIVLP
1aa6   ( 395 )    VrAAYIMgeDPLQtdaelsaVrkAFedLeLVIVQdiFMTkTASaAdVILP
                    bbbbb   aaaa   aaaaaaa     bbbbbb    aaaa   bbbb

                           510       520       530       540       550 
1cxsa  ( 475 )    ATTSYErnDIEsVGdySnrAILAMkkVVdplyeArsdydIFaaLAerLgk
1dmr   ( 475 )    ATTSYErnDIEtIGdySntGILAMkkIveplyeArsdydIFaaVAerLgk
1tmo   ( 484 )    ACttyErnDIDvYgayAnrGILAMqkMveplfdSlsDfeIFtrFAavLgk
1aa6   ( 445 )    STSWGEheGVFTA-ADR--GFQRFfkAvepkwdLktDWqIISeIAtrMgy
                     333  bbbbb      bbbbb            aaaaaaaaaaa   

                           560       570       580       590       600 
1cxsa  ( 525 )    gaeFtegrdemgWIssFYeaAvkqAefknvaMpsfedFwsegiveFpit-
1dmr   ( 525 )    GaeFtegkdemgwIksfYddAakqGkaagvqMpaFdaFwaeGiveFpvt-
1tmo   ( 534 )    ekeYtrnmgemeWLetLYneCkaanag-kfeMpdfatFwkqGyvhFgdg-
1aa6   ( 492 )    --pMhyn-nTqeIWdeLrhlCpdFy------GAtyekMgelgFIQWpCrd
                  aaaaa    aaaaaaaaaaaaaaaa         aaaaaaa bbb     

                           610       620       630       640       650 
1cxsa  ( 574 )    ----eganfvryadFredplfnplgTpsglIEIySknIekmgyddCpahP
1dmr   ( 574 )    ----dgadfvryasFredpllnplgTptglIEIySknIekmgyddCpahP
1tmo   ( 582 )    ----e--vwtrhadFrndpeinplgTpsglIeIfSrkIdqfgyddCkGhP
1aa6   ( 533 )    tsdadqGtsylFke--------kFdTpnglAqFfTc--------------
                              aaaaa             bb   aaaa           

                           660       670       680       690       700 
1cxsa  ( 620 )    twmePaeRl-ggaga-kypLHVvAshPksRlhs--qLNGT-slrdlyava
1dmr   ( 620 )    twmePleRL-dgpga-kypLHIaAshPfnRLhs--qLNGT-vlregyavq
1tmo   ( 626 )    twmeKteRShgGpgsdkhpIwLQschPdkRLhs--qMCESreyretyavn
1aa6   ( 561 )    dwvapidklt-----deypMvlstvrevgHyscRSmTgNCaaLaalade-
                                     bbbb                           

                           710       720       730       740       750 
1cxsa  ( 665 )    gHEpClInpadAaargIadgdvLrVfNdrgqILVGAkvsdaVmpgAIqIy
1dmr   ( 665 )    ghEpClMhpddAaargIadgdvVrVhNdrgqILTGVkvtdaVmkgVIqIy
1tmo   ( 674 )    grEPVyISpvdAkargIkdgdiVrVfNdrgqLLAGAvvsdnFpkgIVrIh
1aa6   ( 605 )    -pGyAqInteDAkrlgIedeaLVwVhsrkgkiITrAqvsdrPnkgAIYmt
                     bbbb aaaaaa       bbbbb    bbbbbbbb       bbb  

                           760       770       780       790       800 
1cxsa  ( 715 )    eGGWYDpl-------dpseegTlDkYGDVNVLSlDvGTSkLAqGNCgQTI
1dmr   ( 715 )    eGGWYdps-------dvtepgTlDkYGDVNVLSaDigTSkLAqgNCgQTV
1tmo   ( 724 )    eGAwYGPVGkdgstegGaevgalCSYGDPnTLTlDigTSkLAqacSaYTC
1aa6   ( 654 )    yQwWp----------------------------------------eykyc
                                              333                   

                           810       820       830    
1cxsa  ( 758 )    LAdVekya--------gapVtvtVFdtp---kgA  
1dmr   ( 758 )    LAeVekyt--------gpavtltgfvAp---kaAe 
1tmo   ( 774 )    LVeFekyq--------gkvpkvsSfdgpievei   
1aa6   ( 682 )    AVrVepiadqraaeqyvideynklktrL--reaala
                  bbbbbb                              


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