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Align your sequence(s)

phycocyanin

class : all alpha number of structures : 12 average size : 166 average PID : 37 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1phn rasmol 1 B 174 B phycocyanin Cyanidium caldarium 1.65 18.3
1cpc rasmol 1 B 174 B C-phycocyanin Cyanobacterium (fremyella diplosiphon) 1.66 18.1
1lia rasmol 1 B 174 B r-phycoerythrin Polysiphonia urceolata 2.80 18.0
1b8d rasmol 1 B 177 B phycoerythrin Griffithsia monilis 1.90 17.5
1all rasmol 1 B 174 B allophycocyanin Spirulina platensis 2.30 19.6
1all rasmol 3 A 174 A allophycocyanin Spirulina platensis 2.30 19.6
1b33 rasmol 1 A 160 A allophycocyanin Mastigocladus laminosus 2.30 21.1
1phn rasmol 1 A 174 A phycocyanin Cyanidium caldarium 1.65 18.3
1cpc rasmol 1 A 174 A C-phycocyanin Cyanobacterium (fremyella diplosiphon) 1.66 18.1
1lia rasmol 1 A 174 A r-phycoerythrin Polysiphonia urceolata 2.80 18.0
1b8d rasmol 1 A 164 A phycoerythrin Griffithsia monilis 1.90 17.5
1qgw rasmol 3 C 177 C b-phycoerythrin beta chain Guillardia theta 1.63 14.9
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Phycobilisome  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1phnb  (   1 )    mldafakvvaqAdargeflsntqldalskmvsegnkrldVvnrItsnasa
1cpcb  (   1 )    mldafakvvsqadargeylsgsqidalsalvadgnkrmdVvnrItgnsst
1liab  (   1 )    mldafsrvvvnsdskaayvsgsdlqalktfindgnkrldAvnyIvsnssc
1b8db  (   1 )    mldafsrvvvtsdakaayvggsdlqslksfindgnkrldAvnyIvsnasc
1allb  (   1 )    mqdaitsvinssdvqgkyldasaiqklkayfatgelrvrAattIsanaan
1alla  (   3 )      sivtkSivnAdaearylspgeldriksfvtsgerrvrIaetMtgarer
1b33a  (   1 )      sivtksivnAdaearylspgeldriksfvssgekrlrIaqiLtdnrer
1phna  (   1 )    mktpiteaiaaAdnqgrflsntelqavngryqraaaSleAarsLtsnaer
1cpca  (   1 )    mktplteavaaAdsqgrflssteiqtafgrfrqasaSlaAakaLtekass
1liaa  (   1 )    mksvitttisaadaagrypstsdlqsvqgniqraaarleAAekLgsnhea
1b8da  (   1 )    mksvitttisaadaagrfpsssdlesiqgniqraaarleAAqkLsgnhea
1qgwc  (   3 )      dafsrvv      aayvggadlqalkkfiseGnkRldSvnsIvsnasc
                     aaaaaaaaaa       aaaaaaaaaaaa aaaaaaaaaaaaa aaa

                           60        70        80        90        100 
1phnb  (  51 )    IvtnAAraLfseqpqli-qpgg  AytnrrmaaClrDMeiILryVsyAIi
1cpcb  (  51 )    IvanAArsLfaeqpqLi-apggn-AytsrrmaaClrDMeiILryVtyAIf
1liab  (  51 )    IVsdAIsGMicenpgLi-tpggn-CytnrrmaaClrDgeiiLryVsyALl
1b8db  (  51 )    IvsdAVsGMicenpgLi-apgg  CytnrrmaAClrDGeiILryVsyALl
1allb  (  51 )    IVkeAVaksLl-ysdvt-rpggn-MyttrryaaCirDLdyYLryAtyAMl
1alla  (  51 )    IikqAGdqLfgkrpdVv-spggn-AygadmtatClrDLdyYLrLItyGIv
1b33a  (  49 )    IvkqAGdqLfqkrpdVv-spggn-aygqemtatclrdLdyYLrLItyGIv
1phna  (  51 )    LingAaqaVyskfpyTsqmpgpqyAssavGkakCarDIgyYLrMVtyCLv
1cpca  (  51 )    LasgAAnaVyskfpyTtsqngpnfAstqtGkdkCvrDIgyYLrMVtyCLv
1liaa  (  51 )    VvkeAGdaCfskygyNk-npgeA-GenqekinkCyrDIdhYMrLInytLv
1b8da  (  51 )    VvkeAGdaCFakysyLk-nageA-GdspekinkCyrDIdhYMrLInysLv
1qgwc  (  51 )    IvsdAVsGMicenpsLi-spsg  CytnrrmaaClrDgeiILryVSyALl
                  aaaaaaaaaaaa  33           aaaaaaaaaaaaaaaaaaaaaaa

                           110       120       130       140       150 
1phnb  ( 101 )    aGdssILddrclngLretYqalgVpgasVAvGIekMkdsAiaiAndps--
1cpcb  ( 101 )    aGdasVLddrCLngLketYlalgTpgsSVavGVqkMkdaAlaiAgdtn--
1liab  ( 101 )    aGdasVLedrCLngLketYialgVptnstvrAVsIMkaAAvcFIsntAsq
1b8db  (  99 )    aGdssVLddrCLngLketYialgVptasSsrAVsIMkaTAtaFItntAsg
1allb  ( 101 )    aGdpsILderVlngLketYnslgVpigaTvqAIqAMkevTaglVg-----
1alla  ( 101 )    agdvtpIeeigvvgVremYkslgTpieAIAeGVraMksVAtslLs-----
1b33a  (  97 )    agdvtpIeeigivgvremYkslgtpidAvaaGVsAMknVAssiLs-----
1phna  ( 101 )    vGgtGPMdeyLiagleeinrtfdLspsWYveALnyIkanHg----Ls---
1cpca  ( 101 )    vGgtGPLddyLiggiaeinrtfdLspswYveALkyIkanHg----ls---
1liaa  ( 101 )    vggtGPLdewGiagarevYrtlnLpsaAYiaAFvfTrdrLciprDMs---
1b8da  (  99 )    vGgtGPVdewGiagsrevyralnLpgsAYiaAFtfTrdrLcvprDMs---
1qgwc  (  99 )    sgdasvLedrCLngLketYsslgVpansNarAVsIMkaCAvAFVnntAsq
                  a   aaaaaa    aaaaaaaa   aaaaaaaaaaaaaa           

                           160       170       
1phnb  ( 149 )    ---gittgdCsaLmaeVgtyFdrAataVq
1cpcb  ( 149 )    ---gitrgdCasLmaeVasyFdkAasaVa
1liab  ( 148C)    rkveviegdCsaLaseVasyCdrVvaaVs
1b8db  ( 149 )    rkvevaagdCqaLqaeAasyFdkVgssId
1allb  ( 146 )    ----------ggAGkeMgiYFdyIcsgLs
1alla  ( 146 )    ----------gadaaeAgsyFdyLigaMs
1b33a  ( 142 )    ----------aeDaaeAgayFdyVagaLa
1phna  ( 146 )    ----------gqAaneAntyIdyAinaLs
1cpca  ( 146 )    ----------gdpaveAnsyIdyAinaLs
1liaa  ( 146 )    ----------aqAGveFctaLdyLinsls
1b8da  ( 146 )    ----------sqAGveFtsaLdyVinsLc
1qgwc  ( 149 )    kklstpqgdCsgLaseVggyFdkVtaaIs
                            aaaaaaaaaaaaaaaaa  


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