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| class : multi domain | number of structures : 5 | average size : 265 | average PID : 57 % |
| PDB code |
start residue |
start chain |
end residue |
end chain |
name | source | resolution | R-factor |
|---|---|---|---|---|---|---|---|---|
1frf
![]() |
4 | S | 264 | S | periplasmic [NiFe] hydrogenase small subunit | Desulfovibrio fructosovorans | 2.7 | 22 |
2frv
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4 | A | 264 | A | periplasmic [NiFe] hydrogenase small subunit | Desulfovibrio gigas | 2.54 | 20.1 |
1e3d
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5 | A | 266 | A | [NiFe] Hydrogenase small subunit | Desulfovibrio desulfuricans | 1.8 | N/A |
1h2r
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1 | S | 267 | S | periplasmic [NiFe] hydrogenase small subunit | Desulfovibrio vulgaris | 1.40 | 21.8 |
1cc1
![]() |
6 | S | 283 | S | periplasmic [nifese] hydrogenase small subunit | Desulfovibrio baculatus | 2.15 | 19.4 |
| pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol) | ||||||||
| external links |
| |
| other info | key to JOY annotation | show related PDB structures | |
| alignment | show WITH Pfam family sequences |
10 20 30 40 50
1frfs ( 4 ) khrpsVVWLHNaectgCTeaAirTikpyidaLildtIsldYQetima
2frva ( 4 ) k---krpsVVYLHNaectgCSesVlrTvdpyvdeLildvIsmdYHetlma
1e3da ( 5 ) srpsVVYLHAaectgCSeallrTyqpfidtLildtIsldYHetima
1h2rs ( 1 ) lmgprrpSVVYLHNaectgCSesvlrAfepyidtlildtlslDYHetima
1cc1s ( 6 ) kkAPVIWVqGqGctgCsvSllnAvhprikeIlldvIslefHptvma
bbbbbb aaaaaaa aaaaaa bbbb
60 70 80 90 100
1frfs ( 51 ) aagetseaalheaLegk-dgYyLVVEGGLPtidgGqwgmvag-------h
2frva ( 51 ) gaghaveealheaIkg---dFvCVIEGGIPmgdgGywgkvgg-------r
1e3da ( 51 ) aageaaeealqaaVngp-dgFIClVEGAIPtgmdnkygyiag-------h
1h2rs ( 51 ) aagdaaeaaleqAVnsp-hgFiAVVEGGIPtaanGiygkvan-------h
1cc1s ( 52 ) segemalahMyeiAekfngnFFLLVEGAIPtakeGrycivgeakahhhev
aaaaaaaaaaaa bbbbb bb 333 bb b
110 120 130 140 150
1frfs ( 93 ) pmietCkkAAakAkgiICIGTCSpyGGvqkakpnpsqAkGVseAL---g-
2frva ( 91 ) nmydiCaeVApkAkavIAIGTCATyGGvqaakpnptgTvGVneALgklg-
1e3da ( 93 ) tmydiCknILpkAkaVVSIGTCACyGGiqaakpnptaAkGIndCYadlg-
1h2rs ( 93 ) tmldICsrILpkAqavIAYGTCATfGGvqaakpnptgAkGVndALkhlg-
1cc1s ( 105 ) tMmeLIrdLApkSlATVAVGTCSAYGGipaaegnvtgSkSVrdFFadeki
baaaaaaaa333 bbbbb aaaaa 333 bb aaaaa
160 170 180 190 200
1frfs ( 139 ) -vkTInIPGcpPNpiNFvgAVvhVLt-k------giPdldengRPklfYg
2frva ( 140 ) -VkAINIAGcpPNpmNfVgTVvhllt-k------gmPeldkqgRPvmfFg
1e3da ( 142 ) -VkAiNVPGcpPNplNMVgTLvAflk-g------qkIeldevgRPvmfFg
1h2rs ( 142 ) -VkAiNIAGcpPNpyNlvgTivyylknk------aaPeldslnRPtmfFg
1cc1s ( 155 ) ekllVNVPGcpPHpdWMvgTlvaawshvlnptehplpeldddgRPllfFg
bbb aaaaaaaaaaaa aaaa
210 220 230 240 250
1frfs ( 181 ) elVhdnCprlphfeasefApsfdseeakkgfCLyelGCkGpvTyNnCPkv
2frva ( 182 ) etVhdnCprlkhfeagefAtsfgspeakkgyCLyelGCkGpdTyNnCPkq
1e3da ( 184 ) qsVhdlCerrkhfdagefApsfnseearkgwCLydvGCKGpeTyNNCPkv
1h2rs ( 185 ) qtVheqCprlphfdagefApsfeseearkgwCLyelGCkGpvTmNnCPki
1cc1s ( 205 ) dNIhenCpyldkydnsefAetftk-----pgCKaelGCKGpsTyADCAkr
aaaaa aaaa 333 333 aaaa
260 270 280
1frfs ( 231 ) lfnq-vnWpVqaghPClGCSepdFwdtMtpfyeqg
2frva ( 232 ) lfnq-vnWpVqaghPCiACSepnFwdlyspfysa
1e3da ( 234 ) lfne-tnWpVaaghPCiGCSepnFwddMtpfyqn
1h2rs ( 235 ) kfnq-tnWpVdaghPCiGCSepdFwdamtpfyqn
1cc1s ( 250 ) rwnnginWcVen-aVCiGCVepdFpdgKspfyvae
333 aaaa
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