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Align your sequence(s)

FAD linked oxidases, C-terminal domain

class : alpha plus beta number of structures : 4 average size : 281 average PID : 11 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1dii rasmol 243 A 521 A P-cresol methylhydroxylase Pseudomonas putida 2.50 17.2
1vao rasmol 274 A 560 A vanillyl-alcohol oxidase Penicillium simplicissimum 2.5 22
1f0x rasmol 274 A 567 A D-lactate dehydrogenase Escherichia coli 1.90 20.9
1i19 rasmol 274 A 613 A cholesterol oxidase Brevibacterium sterolicum 1.70 18.2
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : FAD-oxidase_C  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1diia  ( 243 )    pvfkPFEViFedeadIveIV----daLrplrms-ntIpnsVvIAsTLWEA
1vaoa  ( 274 )    rgyqSYLITLpkdgdLkqAV----diIrplrlg-maLqnvPtIRHILLDA
1f0xa  ( 274 )    knqqvFYIGTn---qpeVLt----eIRrhIlanFenlPvaGeYMHrdIYd
1i19a  ( 274 )    frqrCqSytdIpWreLFapkgadgrTFekfvaesg----gAEAiWyPfTe
                    bbbbbbbb     aaaaa    aaaaaaaa        bbbbbaaaaa

                           60        70        80        90        100 
1diia  ( 288 )    GSahltraqyttepghTpdsvikqMqkdtgmGaWNLYAALygtqeqV---
1vaoa  ( 319 )    AVl-gdkrsyssrtepLsdeeldkIakqlnlgRWNFYGALygpepir---
1f0xa  ( 317 )    iAe--------------lpprMknwrdk---yeHHLLLkMag--dGv---
1i19a  ( 320 )    ---------kPWMKVwtvspslvgkpp-----qAreVsgpynYiFsDnlp
                  aa                 aaaaaaaaa     bbbbbbb     aa   

                           110       120       130       140       150 
1diia  ( 335 )    dvnwkiVtdvFkklgkgrivtqeeagd--tqpFkYraqlmsg-----vpn
1vaoa  ( 365 )    rvlwetIkdaFsaIpgVkfyfpedtpe--nsVLrvrdktmqg-----ipt
1f0xa  ( 402 )    geAkswLvdyFkqaeGdfFvCt-------peegskAflhRf---------
1i19a  ( 372 )    epItdmigaInag-------npgiAplFGpamyeiTklgLaatnAndIWG
                  aaaaaaaaaaa      bbb           aaaaaaaa           

                           160       170       180       190       200 
1diia  ( 378 )    lqefGLynWrg-----ggGsmwFaPvseA----rGseCkkQaamAkrVLh
1vaoa  ( 408 )    ydelkwidWlp-----nGahlfFSPiAkV----sGedAmmQYavTkkrCq
1f0xa  ( 436 )    aAagaAiryqavhsdeVediLaLDIaLrr----nDteWy--ehLppeId-
1i19a  ( 415 )    w-skDVqfyika---ttlrlteGGGAVVTsranIAtVIndFTewFherIe
                                    bbbbb  bb       aaaaaaaaaaaaaaaa

                           210       220       230       240       250 
1diia  ( 419 )    ky------gLDyVAEFiVapr----------------------------d
1vaoa  ( 449 )    eA------gLDFIGtFtVgmr----------------------------e
1f0xa  ( 479 )    sq------LvhkLYYGhFm------------------------------c
1i19a  ( 461 )    fyrakgefPLNGPVeIrccgLdqaadvkvpsvgpptisAtrpRpdhpdWd
                  a            bbbbb                                

                           260       270       280       290       300 
1diia  ( 435 )    MhHvIDVLydrtnpeetkrAdaCFneLLdeFeke------gyaVy--rVn
1vaoa  ( 465 )    MhHiVCIVfnkkdliqkrkVqwLMrtLIddCaan------gwgEy--rth
1f0xa  ( 493 )    YvFHQdYIVkk-----gvdvhaLkeqMlelLqqr------gAqypAehnV
1i19a  ( 511 )    vAIwLNVlGVpgTp----gMfeFYreMEqwMrshYnnddATFRPewskgW
                  bbbbbbbbb          aaaaaaaaaaaaaa                 

                           310       320       330       340       350 
1diia  ( 477 )    ---------trFqd-rvaqSyg-----pvkRkleHaikravDpnnil-ap
1vaoa  ( 507 )    ---------laFmd-qimetynw--nnssflrfnevlknavdpnGii-ap
1f0xa  ( 532 )    ---------ghlYk-Ap--------------etlqkfyrendptnsm-np
1i19a  ( 557 )    AFgpdpytdndiVtnkMratYiegVpttenWdtararynqidphrvftng
                              aa aaa            aaaaaaaaaaa         

                           360     
1diia  ( 511 )    grsGidlnndf      
1vaoa  ( 544 )    GksGvwPsqyshvtwkl
1f0xa  ( 557 )    GiGktskrknw      
1i19a  ( 607 )    fmdkllp          
                                   


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