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Align your sequence(s)

Dihydroorotate dehydrogenase

class : alpha beta barrel number of structures : 4 average size : 323 average PID : 26 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1h7w rasmol 533 A 844 A dihydropyrimidine dehydrogenase [NADP+] Sus scrofa 1.9 17.4
1ep3 rasmol 1 A 311 A dihydroorotate dehydrogenase B, catalytic subunit Lactococcus lactis 2.10 19.5
1d3g rasmol 30 A 396 A dihydroorotate dehydrogenase Homo sapiens 1.6 16.8
2dor rasmol 1 A 311 A dihydroorotate dehydrogenase A Lactococcus lactis 2.0 16.1
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : DHOdehase  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1h7wa  ( 533 )                                                  isve
1ep3a  (   1 )    m----------------------------------------tennrLsVk
1d3ga  (  30 )    matgderfYaehlMptlqglldpesAhrlAvrfTslglLPfqdsdmLeVr
2dora  (   1 )                                                 mLntt
                                                                  bb

                           60        70        80        90        100 
1h7wa  ( 537 )    MaglkFinPFGLaSaaPTtsssmIrrAFea-gWGFALTkTFSldkdivt-
1ep3a  (  11 )    LpgLdLkNPIIPASg-CFgFGeeyakyydLnkLGSIMVkATtlh--prfG
1d3ga  (  83 )    vlghkFrNPVGIAAG-FDKhGeAVdgLYkM-gFGFVEIGSVTPk--pqeg
2dora  (   6 )    FanakFanPFMNASGVhCmtiedLeeLkas-qAGAYITKSSTle--kreG
                  b  bbb   bbb           aaaaaa      bb             

                           110       120       130       140       150 
1h7wa  ( 585 )    nvspriVrGttsgpmygpgqsSfLnieliSektAayWc-qSVteLkadfp
1ep3a  (  58 )    nptprvAeta----------sGmLnaiglqNpGlevImtekLpwLnenfp
1d3ga  ( 129 )    nprprVfrLped--------qAVINrYgFnShGLsvVe-hrLrarqqkqa
2dora  (  53 )    nplpryvdLe----------lGSINSmGLPNlgFdyYl-dyVlknqkena
                       bbbb            bbbb        aaaaa aaaaaaaaa  

                           160       170       180       190       200 
1h7wa  ( 634 )    -d----niVIASImCs----ynkndWmeLSrkAeasg-AdALELnLscph
1ep3a  (  98 )    -e----LpIIANVAgs-----eeadYvaVCakIGdaaNVkAIELNIscpN
1d3ga  ( 170 )    kltedGlPLGVNLGknktsvdaaedYAeGVrvLGpL--AdYLVVNvSSpn
2dora  (  92 )    qe----gpIFFSIAGm-----saaeNiaMLkkIqesdFsGITELNLScPN
                          bbbbb         aaaaaaaaaaa       bbbbb     

                           210       220       230       240       250 
1h7wa  ( 674 )    gmgergmglaCGqdpelVrnICrwVrqAVq-------ipFFAkLtPnvt-
1ep3a  ( 138 )    vkhg---gqaFGtdpevAaaLVkaCkavSk-------vpLYVKLSPnvt-
1d3ga  ( 218 )    ta---------gLgkaelrrlLtkVlqerdglrrvhrPaVLVKIaPdlts
2dora  ( 133 )    vp----gkpqlAydfeaTekLLkeVftfFt-------kpLGVKLPPYfdl
                            333 aaaaaaaaaaaaaa           bbbbb      

                           260       270       280       290       300 
1h7wa  ( 716 )    -dIvsIArAAkeGgAdGVTATntvs-glmglkadgtpwPavgagkrttyg
1ep3a  ( 177 )    -dIvpIAkaVeaagAdGLTMIntlm-gvrfdlktrqpiLan------itg
1d3ga  ( 263 )    qdkedIAsVVkelgIdGLIVTNTTv-srpa-----gLqGa----lrsetG
2dora  ( 172 )    vhFdiMAeiLnqfpLtYVNSVNSignglfidpeaesvvIkPk----dGfG
                    aaaaaaaaaa    bbbb   bb b                      b

                           310       320       330       340       350 
1h7wa  ( 764 )    gvsGtaIrpiAlrAVttIaralpg-FpILAtggIdsAeSGlqFlhsgAsV
1ep3a  ( 219 )    glSGpaIkpvAlklIhqVaqdV-d-ipIIGMGGVanAqdVLeMYmagAsA
1d3ga  ( 303 )    GLSgkpLrdlSTqTIreMyalTqgrvpIIGVGgVssGqDALeKIrAGAsL
2dora  ( 218 )    GiGgayIkptAlaNVraFytrLkpeIqIIGTGGIetGqdAfeHLlcGAtM
                  bbb 333aaaaaaaaaaaa        bbbb     aaaaaaaaaa   b

                           360       370       380       390    
1h7wa  ( 813 )    LQVcsavqnqdftvIqdYctgLkallylksie              
1ep3a  ( 267 )    VAVGtaNfa-dpfvCpkIidkLpeLMdqyrIesLesLiqevkegkk
1d3ga  ( 353 )    VQLYTALTFwGPpVVgkVKreLealLkeqgfggVtdAiGadhr--r
2dora  ( 268 )    LQIGTaLhkegpaIFdrIikeLeeiMnqkgyqsiadFhGklksl  
                  bbb aaaaa    aaaaaaaaaaaaaaa                  


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