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Align your sequence(s)

TCP-1/cpn60 chaperonin family, apical domain

class : alpha beta number of structures : 4 average size : 160 average PID : 37 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1kid rasmol 184 - 376 - GroEL (hsp60 class) Escherichia coli 1.7 18
1srv rasmol 192 A 336 A GroEL (hsp60 class) Thermus thermophilus 1.70 19.9
1a6d rasmol 215 B 367 B thermosome Thermoplasma acidophilum 2.6 21.5
1ass rasmol 1 - 152 - thermosome, alpha subunit Thermoplasma acidophilum 2.3 22.2
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1kid   ( 184 )    glvprgseGMqFdrGylspyFinkpetgaVeLesPfILLAdkkIs-----
1srva  ( 192 )            gyqFdkGYispyFVtnpetmeAvLedAfILIVekkVs-----
1a6db  ( 215 )           ngiiVdkekVhpgMpd-------vvkdAkIALLdapLeikkpe
1ass   (   1 )          msgivIdkekVhskMpd-------vvknAkIALIdsaLeikkte
                           bbb                  bbbbbbbbbb          

                           60        70        80        90        100 
1kid   ( 229 )    ------------------------nireMlpVLeaVakagkpLLIIAedV
1srva  ( 229 )    ------------------------nvreLlpILeqVaqtgkpLLIIAedV
1a6db  ( 251 )    -----fdtnlriedpsmiqkflaqeenmlremVdkIksvgAnVVITqkgI
1ass   (  38 )    ieakvq--isd---pskiqdflnqetntFkqmVekIkksgAnVVLCqkgI
                                           aaaaaaaaaaaaa    bbbb    

                           110       120       130       140       150 
1kid   ( 255 )    egeAlatLvvntmrgivkVAAVkAPgfgdrrkaMLqDIAtLTgGtvIsee
1srva  ( 255 )    egeAlatLvvnklrgtlsVAAVkApgfgdrrkemLkdIaavTgGtvISee
1a6db  ( 296 )    ddmAqhyLSra------gIYAVrrVk-----ksdMdkLakaTgAsivs--
1ass   (  83 )    ddvAQhyLAke------gIYAVrrVk-----ksdMekLakATgAkivt--
                   aaaaaaaaa         bbb         aaaaaaaaaaa        

                           160       170       180       190       200 
1kid   ( 305 )    igmeLekAtledLGqAkrVvInk----dtTtIidGvgeeaaiqgrvaqIr
1srva  ( 305 )    lgfkLenAtlsmLGrAerVrItk----deTtIvgGk              
1a6db  ( 333 )    ---tideIsssdLGtAerVeQvkvgedymTfVtgCknp            
1ass   ( 120 )    ---dLddLtpsvLGeAetVeerkigddrmTfVmgCk              
                      333  333 bbbbbbbb        bbbbbb               

                           210       220    
1kid   ( 351 )    qqieeatsdydreklqeRvakLagGv
1srva                                       
1a6db                                       
1ass                                        
                                            


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