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Align your sequence(s)

FAD linked oxidases

class : alpha plus beta number of structures : 4 average size : 527 average PID : 15 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1dii rasmol 7 A 521 A P-cresol methylhydroxylase Pseudomonas putida 2.50 17.2
1vao rasmol 6 A 560 A vanillyl-alcohol oxidase Penicillium simplicissimum 2.5 22
1f0x rasmol 9 A 567 A D-lactate dehydrogenase Escherichia coli 1.90 20.9
1i19 rasmol 57 A 613 A cholesterol oxidase Brevibacterium sterolicum 1.70 18.2
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : FAD-oxidase_C  FAD_binding_4  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1diia  (   7 )        avlPkgVtqgefnkAVqkFralLgddnVlvesd-----qlvpynkI
1vaoa  (   6 )    efrPltlPpkLslsdFneFIqdIiriVgsenVeVisvdgsymkpthtHDp
1f0xa  (   9 )                   nkaflneLarlVgsshlltd-----pakTaryrkG
1i19a  (  57 )                vaplpt-PpnfpndIa---lfqq-----------aYqN
                                  aaaaaaaaaaa    bb                 

                           60        70        80        90        100 
1diia  (  48 )    mMPvenaaH--aPSAAVtAttveqVqgVVkICnehkIpIWTISTGrNfGy
1vaoa  (  61 )    hhVmdqdyF--lASAiVAPrnVaDVqsIVglAnkfsFPLWPISiGrNsGY
1f0xa  (  39 )    frsgq---g--dAlAVVfPgsLleLwrVLkACvtadkIILMQAanTgL-T
1i19a  (  80 )    WSk----eImldaTwVCsPktpqdVVrLAnwAhehdYkIRPrGamHgW-T
                                bbb    aaaaaaaaaaaaa    bbbb        

                           110       120       130       140       150 
1diia  (  96 )    GsAAPVq----rGQVILdLkk-MnkIikIdp--emcyAlVePGVtFgqMy
1vaoa  ( 109 )    GGAAPRV----sGSVVLdMGknMnrvleVnv--egayCVVEPGVtYhdLh
1f0xa  (  83 )    egSTPngndYdrdVVIISTlr-Ldk-lhvLg--kGeqVLAYPGTtLysLe
1i19a  ( 125 )    PLTVek-ganvekvILAdTmthLng-itVntggpvatVtAgAGAsIeaIV
                                bbbb        bbbb      bbbb     aaaaa

                           160       170       180       190       200 
1diia  ( 139 )    dyIqennl--pVmL-sFSAPSai-AGPVGNTMDrGvGYTp----------
1vaoa  ( 153 )    nyLeannlrdkLwL-dVPdL-Gg-GSVLGNAVErGvGYTp----------
1f0xa  ( 129 )    kaLkpl----grePHsvIGSscigASVIGgICnNSGGSlV----------
1i19a  ( 173 )    teLqkh----dlGWANLPAP-Gv-LSIGGALAVNAHgAaLpavgqttlpG
                  aaaa       bb             aaaaaa                  

                           210       220       230       240       250 
1diia  ( 175 )    --yGehfmmQCGMEVVlA--ng--dvyrTGmGgvp---------------
1vaoa  ( 190 )    --yGdhwmmHSGMEVVlA--ng--ellrTgmGalpdpkrpetmglkpEdq
1f0xa  ( 165 )    --qrGPA-yTeMSLFArInedgkLtLvnhLgI--dLgetpeqiLskLddd
1i19a  ( 217 )    HTyGSLSNLVteLtAVVwng------------------------------
                           bbbbbbb         bbb                      

                           260       270       280       290       300 
1diia  ( 204 )    -gsn----------------twQifkwGygp-------tldgmFTqa-NY
1vaoa  ( 234 )    pwSk----------------iAHlfpyGfgp-------yiDglFSqs-Nm
1f0xa  ( 210 )    rIkdddVrhdgrhAhDydYvhrVrdieadtPARyNAdpdrLfeSSGCAGK
1i19a  ( 237 )    --------------------------ttYaletYqRndprITPLLTNLGR
                                                                    

                           310       320       330       340       350 
1diia  ( 229 )    GICTkMGfwLmpkppvfkPFEViFedeadIveIVd----aLrplrms-nt
1vaoa  ( 260 )    GIVTKIGiwLmpnprgyqSYLITLpkdgdLkqAVd----iIrplrlg-ma
1f0xa  ( 260 )    LAVFAVRLdTfeaeknqqvFYIGTn---qpeVLte----IRrhILanFen
1i19a  ( 261 )    CFLTsVtMQAGpNf-rQrCqSytdIpWreLFapkgadgrTFekfVae---
                   bbbbbbbb bb    bbbbbbbb     aaaaaa    aaaaaaa    

                           360       370       380       390       400 
1diia  ( 274 )    IpNsVVIAsTLWEAGSahltraqyttepghTpdsvikqMqkdtgm--GaW
1vaoa  ( 305 )    LqNvPTIRHILLDAAVl-gdkrsyssrtepLsdeeldkIakqlnl--gRW
1f0xa  ( 303 )    LPvAGEYMHrdIYdiAe--------------lpprMknwrdk-----yeH
1i19a  ( 307 )    -SGGAEAiWyPfTe---------kPWMKVWtvspslvgkppqAreVsgpy
                      bbbbbaaaaaaa                 aaaaaaaaa       b

                           410       420       430       440       450 
1diia  ( 322 )    NLYAALYgtqeqVdvnwkiVtdvFkklgkgrivtqeeagdtqpFkYRaqL
1vaoa  ( 352 )    NFYGALYgpepirrvlwetIkdaFsaIpgVkfyfpedtpensVLrvRdkT
1f0xa  ( 391 )    HLLLkMAg--dGvgeAkswLvdyFkqa-eGdfFvCt-----peegskAfl
1i19a  ( 363 )    nYiFsDnlpepItdmigaInagnpgiAplF----GpamyeiTklgLaatn
                  bbbbbb   aaaaaaaaaaaaaa       bbb         aaaaaaaa

                           460       470       480       490       500 
1diia  ( 372 )    MsGvpnlqEfGLynWrg-----ggGSMWFaPvseAr----GseCkkQaam
1vaoa  ( 402 )    MqGiPtydElkWidWlp-----nGAHLFFSPiAkVs----GedAmmQYav
1f0xa  ( 433 )    hRf---aAagaAiryqavhsdeVedILALDIALrrn----DteWy--ehL
1i19a  ( 409 )    AndIWGw-SkDVQFyika---ttlrlTEGGGAVVTsranIAtVIndFTew
                                          bbbbb  bb       aaaaaaaaaa

                           510       520       530       540       550 
1diia  ( 413 )    AkrVLhk------ygLDyVAEFIVapr-----------------------
1vaoa  ( 443 )    TkkrCqe------AgLDFIGtFtVgmr-----------------------
1f0xa  ( 474 )    ppeId-s------qLvhkLYYGHFMC------------------------
1i19a  ( 455 )    FherIefyrakgefPLNGPVEIRCCgLDqaadVkvpsvgpPTISATrpRp
                  aaaaaaa            bbbbb                          

                           560       570       580       590       600 
1diia  ( 434 )    -----dMhHvIDVLYdrtnpeetkrAdaCFneLLdeFeke------gyaV
1vaoa  ( 464 )    -----eMhHiVCIVFnkkdliqkrkVqwLMrtLIddCaan------gwgE
1f0xa  ( 493 )    ------YVFHQDYIVkk-----gvdvhaLkeqMlelLqqr------gAqy
1i19a  ( 505 )    dhpdWdVAIWLNVLGVpgTp----gMfeFYreMEqwMrshYnnddATFRP
                        bbbbbbbbb          aaaaaaaaaaaaaa           

                           610       620       630       640       650 
1diia  ( 473 )    y--rV------NTrFqdrvaqSyg---------pvkRkleHaiKravDpn
1vaoa  ( 503 )    y--RT------HLAFmdqimetynw------nnssflrfnevlKnavDpn
1f0xa  ( 526 )    PAEhN------VGHlYkAp------------------etLqkfYrenDpT
1i19a  ( 551 )    EWSKgWAFgpdPYtdndiVtnkMratYiegVpttenWdtArarYnqIDph
                                 aaaaa                aaaaaaaaaaa   

                           660       670 
1diia  ( 506 )    nILaPgRsGId-lnndf     
1vaoa  ( 539 )    GIIaPGKsGvWPsqyshvtwkl
1f0xa  ( 552 )    NsMNPGIGktskrknw      
1i19a  ( 601 )    rVFTngFMdkLLp         
                                        


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