Home   |   Search   |   Browse   |   Software   |   Help   

Align your sequence(s)

azurin/plastocyanin

class : all beta number of structures : 29 average size : 113 average PID : 33 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
2aza rasmol 1 A 129 A azurin Alcaligenes denitrificans 1.80 15.7
1dz0 rasmol 1 A 129 A azurin II Alcaligenes xylosoxydans xylosoxydans 1.75 19.2
1joi rasmol 1 - 128 - azurin Pseudomonas fluorescens biotype A 2.05 17
1nwp rasmol 1 A 128 A azurin Pseudomonas putida 1.60 18.1
1jzg rasmol 1 A 128 A azurin Pseudomonas aeruginosa 1.40 22.6
1rkr rasmol 1 A 129 A azurin-I Alcaligenes xylosoxidans 2.45 17.3
1cuo rasmol 1 A 129 A azurin iso-2 Methylomonas sp. J 1.60 17.5
1adw rasmol 1 A 123 A pseudoazurin Paracoccus pantotrophus 2.50 18.9
1bqk rasmol 1 - 124 - pseudoazurin Achromobacter cycloclastes 1.35 17.6
1paz rasmol 1 - 120 - pseudoazurin alcaligenes faecalis 1.55 18
1pmy rasmol 1 - 123 - pseudoazurin Methylobacterium extorquens, strain am1 1.50 19.9
1iuz rasmol 0 - 99 - plastocyanin Ulva arasakii 1.60 17.6
7pcy rasmol 0 - 99 - plastocyanin enteromorpha prolifera 1.80 11.7
2plt rasmol 0 - 99 - plastocyanin Chlamydomonas reinhardtii 1.50 16.8
9pcy rasmol 1 - 99 - plastocyanin Phaseolus vulgaris N/A N/A
1ag6 rasmol 1 - 99 - plastocyanin Spinacia oleracea 1.70 19.1
1plc rasmol 1 - 99 - plastocyanin Populus nigra, variant italica 1.33 15
1byo rasmol 1 A 99 A plastocyanin Silene pratensis 2.00 18.9
1plb rasmol 1 - 97 - plastocyanin Petroselinum crispum N/A N/A
1baw rasmol 1 A 105 A plastocyanin Phormidium laminosum 2.80 19.3
1nin rasmol 1 - 105 - plastocyanin Anabaena variabilis N/A N/A
1m9w rasmol 1 A 98 A plastocyanin Synechocystis sp. N/A N/A
1bxv rasmol -2 A 99 A plastocyanin Synechococcus sp. 1.80 15.9
2b3i rasmol 1 A 97 A plastocyanin Prochlorothrix hollandica N/A N/A
1kdj rasmol 1 - 102 - plastocyanin Adiantum capillus-veneris 1.70 23.4
1qhq rasmol 2 A 140 A auracyanin B Chloroflexus aurantiacus 1.55 19.8
2rac rasmol 1 A 105 A amicyanin Paracoccus denitrificans 1.30 18.2
1id2 rasmol 1 A 106 A amicyanin Paracoccus versutus 2.15 17.4
1gy1 rasmol 2 A 155 A rusticyanin Thiobacillus ferrooxidans 1.65 16.7
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : copper-bind  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
2azaa  (   1 )                     a--------------------qçeatIeSn-d-
1dz0a  (   1 )                     a--------------------qçeatVeSn-d-
1joi   (   1 )                     a--------------------eçkvtVdSt-d-
1nwpa  (   1 )                     a--------------------eçkvtVdSt-d-
1jzga  (   1 )                     a--------------------eçsvdIqGn-d-
1rkra  (   1 )                     a--------------------eçsvdIaGn-d-
1cuoa  (   1 )                     a--------------------sçettVtSg-d-
1adwa  (   1 )                                           atheVhMlnkg
1bqk   (   1 )                                           adfeVhMlnkg
1paz   (   1 )                                           enieVhMlnkg
1pmy   (   1 )                                           devaVkMlnsg
1iuz   (   0 )                                            aqiVkLGgd-
7pcy   (   0 )                                            aaiVkLGgd-
2plt   (   0 )                                            datVkLGad-
9pcy   (   1 )                                             leVlLGsg-
1ag6   (   1 )                                             veVlLGgd-
1plc   (   1 )                                             idVlLGad-
1byoa  (   1 )                                             aeVlLGss-
1plb   (   1 )                                             aeVkLGsd-
1bawa  (   1 )                                           etftVkMGad-
1nin   (   1 )                                           etytVkLGsd-
1m9wa  (   1 )                                           anatVkMGsd-
1bxva  (  -2 )                                           qtvaIkMGad-
2b3ia  (   1 )                                           asvqIkMGtd-
1kdj   (   1 )                                             akVeVGde-
1qhqa  (   2 )        anapgGsnvvnetp--------------------aqtveVrAapd-
2raca  (   1 )     dkAtipsespfaaaeva--------------------dgAivVdIa---
1id2a  (   1 )    qdkItvtsekPvaaadvp--------------------adavvVgIe---
1gy1a  (   2 )       tldttwkeAtlpqVkamlqkDtGkvsgdtVtYsgktVhVVAAAvlp-
                                                           bbbbb    

                           60        70        80        90        100 
2azaa  (  12 )    ---amqYdl-----keMvVdksÇkqFtVhLkHvgkmaksamGHNWVLTk-
1dz0a  (  12 )    ---amqYnv-----keIvVdksÇkqFtMhLkHvgkmakvamGHNLVLTk-
1joi   (  12 )    ---qmsFnt-----kaIeIdksÇktFtVeLtHsgslpknvmGHNWVLSs-
1nwpa  (  12 )    ---qmsFnt-----kdIaIdksÇktFtVeLtHsgslpknvmGHNLVISk-
1jzga  (  12 )    ---qmqFnt-----naItVdksÇkqFtVnLsHpgnlpknvmGHNWVLSt-
1rkra  (  12 )    ---gmqFdk-----keItVSksÇkqFtVnLkHpgklaknvmGHNWVLTk-
1cuoa  (  12 )    ---tmtYst-----rsIsVpasÇaeFtVnFeHkghmpktgmGHNWVLAk-
1adwa  (  12 )    esgamVFep-----afvrAep---gdvInFvptd-k-----sHNVeAI--
1bqk   (  12 )    kdgamVFep-----aslkVap---gdtVtFiptd-k-----gHNVeTI--
1paz   (  12 )    aegamVFep-----ayIkAnp---gdtVtFipvd-k-----gHNVeSi--
1pmy   (  12 )    pggmmVFdp-----alVrLkp---gdsIkFlptd-k-----gHNVeti--
1iuz   (   9 )    -dgslaFvp-----skIsVaa---geaIeFvNnagf-----pHNIvFd--
7pcy   (   9 )    -dgslaFvp-----nnitVga---gesIeFiNnagf-----pHNIvFd--
2plt   (   9 )    -sgaleFvp-----ktltIks---getVnFvNnagf-----pHNIvFd--
9pcy   (   9 )    -dgslvFvp-----sefsVps---gekIvFkNnagf-----pHNVvFd--
1ag6   (   9 )    -dgslaFlp-----gdfsVas---geeIvFkNnagf-----pHNVvFd--
1plc   (   9 )    -dgslaFvp-----sefsIsp---gekIvFkNnagf-----pHNIvFd--
1byoa  (   9 )    -dgglaFvp-----sdlsIas---gekItFkNnagf-----pHNDLFd--
1plb   (   9 )    -dgglvFsp-----ssftvaa---gekItFkNnagf-----pHNIvFd--
1bawa  (  11 )    -sgllqFep-----anvtVhp---gdtVkWvNnklp-----pHNIlFd--
1nin   (  11 )    -kgllvFep-----akltIkp---gdtVeFlNnkvp-----pHnVvFD--
1m9wa  (  11 )    -sgalvFep-----stvtIka---geeVkWvNnkls-----pHNIVFa--
1bxva  (   9 )    -ngmlaFep-----stieIqa---gdtVqWvNnkla-----pHNVvVe--
2b3ia  (  11 )    -kyaplYep-----kalsIsa---gdtVeFvMnkvg-----pHNViFd--
1kdj   (   9 )    -vgnfkFyp-----dsitVsa---geaVeFtLvGet-----gHNIvFd--
1qhqa  (  27 )    ---alaFaq-----tslsLpAnt-vVrLdFvNqNnl---gvqHNWVLVng
2raca  (  27 )    ---kmkYet-----pelhVkv---gdtVTWINream-----pHNVhFv--
1id2a  (  28 )    ---kmkYlt-----pevtIka---getVyWvNgevm-----pHNVAFk--
1gy1a  (  48 )    gfpfpSFEVhdkknPtLqIpagA-tVdVTFINTnk----gfgHDFDITk-
                        b        bbbb       bbbbbb             bb   

                           110       120       130       140       150 
2azaa  (  53 )    -eadkegVAtdGmnaglaqdyVk-agDtrViahTkVIG-G----gesdsv
1dz0a  (  53 )    -dadkqaVAtdGmgaglaqdyVk-agDtrviahTkVIg-G----gesdsv
1joi   (  53 )    -aadmpgIasdGmaagidknyLk-egDtrviahTkIIG-A----gekdsv
1nwpa  (  53 )    -eadmqpIatdGlsagidkqyLk-dgDarviahTkVIg-a----gekdsv
1jzga  (  53 )    -aadmqgVvtdGmasgldkdyLk-pdDsrViAHTkLIG-s----gekdsv
1rkra  (  53 )    -qadmqgAVndGmaagldnnyvk-kdDarViahTkVIG-G----getdsv
1cuoa  (  53 )    -sadVgdVAkeGahagadnnfVt-pgdkrViafTpIIg-G----gektsv
1adwa  (  46 )    -keILPe-------------gve-----------sfkski----nesytl
1bqk   (  46 )    -kgMiPd-------------gAe-----------afkSki----nenykv
1paz   (  46 )    -kdmipe-------------gae-----------kfkSki----nenyvl
1pmy   (  46 )    -kgMapd-------------gad-----------yvkttv----gqeavv
1iuz   (  43 )    -edaVpa-------------gv--dAdaiSyd--dyLnsk----getvvr
7pcy   (  43 )    -edaVpa-------------gv--dadaiSae--dylnsk----gqtvvr
2plt   (  43 )    -edaIps-------------gv--nAdaiSrd--dyLnap----getysv
9pcy   (  43 )    -edeIpa-------------gv--davkIsmpeeellnap----getyvv
1ag6   (  43 )    -edeIps-------------gv--daakisMseedllnap----getykv
1plc   (  43 )    -edsIps-------------gv--daskismseedllnak----getfev
1byoa  (  43 )    -edeVpa-------------gv--dvtkismpeedllnap----geeysv
1plb   (  43 )    -edevpa-------------gv--naekisqp--eylnga----getyev
1bawa  (  45 )    -dkqVpg-------------askelAdkLshs--qlMfsp----gesyeI
1nin   (  45 )    -aalNpa-------------ksadlAkslShk--qlLmsp----gqstst
1m9wa  (  45 )    -ad---g-------------vd--adtaAklshkglAfaa----gesftS
1bxva  (  49 )    -g-----------------------qpelshk--dlAfsp----getfea
2b3ia  (  45 )    k---Vpa-------------ge--sApalsnt--klaiap----gsfysv
1kdj   (  43 )    ipagapg-------------tvaseLkaAsMdendlLsed----epsfkA
1qhqa  (  65 )    gddvAaaVntaAqnn-adAlfVPppdTpnAlAWTaMLn-a----gesgsV
2raca  (  59 )    -agvLge----------------------aalkGpmMk-k----eqAYsL
1id2a  (  60 )    -kgiVge----------------------dafrGemMt-k----dqAYAI
1gy1a  (  92 )    ---kgppYavmPvId-------------pivaGTgfSpvPkdgkfgyTnf
                                                                bbbb

                           160       170       180       190       200 
2azaa  (  96 )    tFdvskLtpgeaYAYFCSfpgHwa-mMkgtLkLsn               
1dz0a  (  96 )    tFdvskIaagenYAYFCSfpgHwa-mMkgtLklgs               
1joi   (  96 )    tFdVskLaagtdyaFFCSfpgHis-mMkgtVtvk                
1nwpa  (  96 )    tfdVskLaagekYGFFCSfpgHis-mMkgtVtlk                
1jzga  (  96 )    tfdVskLkegeqYmFFCTfpgHsa-lMkgtLtLk                
1rkra  (  96 )    tFdVskLaagedYAYFCSfpgHfa-lMkgvLkLvd               
1cuoa  (  96 )    kfkvsaLskdeaYtYFCSypgHfs-mMrgtLklee               
1adwa  (  67 )    tVt---ep--GLYGVkCt--phfgmGMVGLVQVgdaPenldaAktakMpk
1bqk   (  67 )    tFt---ap--GVYGVkCt--phygmGMVgVVqVgdapanleaVkgakNpk
1paz   (  67 )    tVt---qp--gAYLVkCt--phyamGMIALIAVgdspanldqIvsakKpk
1pmy   (  67 )    kFd---ke--GVyGFkCa--phymmGMVALVVVgdkrdnleaAksvqHnk
1iuz   (  73 )    kLs---tp--gvYgVyCe--phagagMkMtItVq                
7pcy   (  73 )    kLt---tp--gtYgVyCd--phsgagMkMtItVq                
2plt   (  73 )    kLt---aa--geYgYyCe--phqgagMvGkIiVq                
9pcy   (  73 )    tLd---tk--gtYsFyCs--phqgagMvgkVtVn                
1ag6   (  73 )    tLt---ek--gtYkFyCs--phqgagMvgkVtVn                
1plc   (  73 )    aLs---nk--geYsFyCs--phqgagMvgkVtVn                
1byoa  (  73 )    tLt---ek--gtYkFyCa--phagagMvgkVtVn                
1plb   (  71 )    tLt---ek--gtYkFyCe--phagagMkGeVtVn                
1bawa  (  75 )    tFssdfpa--gtYtYyCa--phrgagMvGkItVe----------------
1nin   (  75 )    tFpadApa--geYtFyCe--phrgagMvGkItVa----------------
1m9wa  (  72 )    tFt---ep--gtYtYyCe--phrgagMvgkVvVe                
1bxva  (  73 )    tFs---ep--gtytYyCe--phrgagMvGkIvVq                
2b3ia  (  71 )    tLg---tp--gtYsFyCt--phrgagMvGtItVe                
1kdj   (  76 )    kVs---tp--gtYtFyCt--phksanMkgtLtVk                
1qhqa  ( 109 )    tFrT--pap-gtylYICTfpgHylagMkgtLtVtp               
2raca  (  81 )    tFt---ea--gtYdYhCt--php--fMrgkVvVe                
1id2a  (  82 )    tFn---ea--gsYdYfCt--php--fMrgkViVe                
1gy1a  ( 126 )    tWhP--ta--gtYyYVCqipghAatgMfgkIvVk                
                  b          bbbbb           bbbbbb                 

                           210   
2azaa                            
1dz0a                            
1joi                             
1nwpa                            
1jzga                            
1rkra                            
1cuoa                            
1adwa  ( 110 )    kArerMdaelaqVn 
1bqk   ( 110 )    kAqerLdaaLaalgn
1paz   ( 110 )    iVqerLekvia    
1pmy   ( 110 )    lTqkrLdplfaqIq 
1iuz                             
7pcy                             
2plt                             
9pcy                             
1ag6                             
1plc                             
1byoa                            
1plb                             
1bawa  ( 105 )    --------------g
1nin   ( 105 )    --------------g
1m9wa                            
1bxva                            
2b3ia                            
1kdj                             
1qhqa                            
2raca                            
1id2a                            
1gy1a                            
                                 


For comments or questions, please send us email. Copyright © 1997-2005 The HOMSTRAD authors