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Align your sequence(s)

glyceraldehyde 3-phosphate dehydrogenase

class : multi domain number of structures : 8 average size : 338 average PID : 55 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1hdg rasmol 1 O 331 O D-glyceraldehyde-3-phosphate dehydrogenase Thermotoga maritima 2.50 16.6
1gd1 rasmol 0 O 333 O D-glyceraldehyde-3-phosphate dehydrogenase Bacillus stearothermophilus 1.80 17.7
1cer rasmol 1 O 333 O D-glyceraldehyde-3-phosphate dehydrogenase Thermus aquaticus 2.50 20.5
1gyp rasmol 1 A 358 A glyceraldehyde-3-phosphate dehydrogenase Leishmania mexicana 2.80 19.8
1gga rasmol 1 O 358 O D-glyceraldehyde-3-phosphate dehydrogenase Trypanosoma brucei brucei 3.20 17.6
3gpd rasmol 1 R 334 R D-glyceraldehyde-3-phosphate dehydrogenase Homo sapiens 3.50 33.0
1gpd rasmol 1 G 334 G D-glyceraldehyde-3-phosphate dehydrogenase Homarus americanus 2.90 N/A
1gad rasmol 0 O 330 O D-glyceraldehyde-3-phosphate dehydrogenase Escherichia coli 1.80 19.7
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : gpdh  gpdh_C  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1hdgo  (   1 )      arVAINGFGrIGrLVYrIiyerknpd--IeVvAINDl-tdTktLAhlL
1gd1o  (   0 )     avkVGINGFGrIGrNVFrAAlknpd----IeVvAVNDl-tdAntLAhlL
1cero  (   1 )      mkVGINGFGrIGrQVFrILhsrgv-----eVaLINDl-tdnktLAhlL
1gypa  (   1 )    apikVGINGFGrIGrMVFqAICdqgligteIdVvAVVdmstnAeyFayqM
1ggao  (   1 )     TikVGINGFgrIGrMVFqALcddglLgneIdVvAVVdmntdAryFayqM
3gpdr  (   1 )    gkvkVGVDGFgrIGRLVtrAafnsgkV----divAINDPfidlhyMvymF
1gpdg  (   1 )      skIGINGFgrIGrLVLrAalscga-----qvvAVNDPfialeyMvymF
1gado  (   0 )     tikVGINGFGrIGrIVFrAAqkrsd----IeIvAINDl-ldadyMAymL
                     bbbbb    aaaaaaaaaa          bbbbb     aaaaaaaa

                           60        70        80        90        100 
1hdgo  (  45 )    kyDsvhkkFpgkVeyt--------enSLiVdgkeIkVfae-pdPskLpWk
1gd1o  (  45 )    kyDsvhgrldaeVsvn--------gnnLvVngkeIiVkae-rdPenLaWg
1cero  (  45 )    kyDsiYhrFpgeVayd--------dqyLyVdgkaIrAtav-kdPkeIpWa
1gypa  (  51 )    khDtvHgrPkYtVeavksspsvetadVLvVnghrIkCvkAqrnPadLpWg
1ggao  (  50 )    kydsvHgkFkhsVsTtkskpsvakddTLvVnghrIlCvkaqrnPadLpWg
3gpdr  (  47 )    qyDsthgkfhgtVkae--------dgkLvIdgkaItIfqe-rdPenIkWg
1gpdg  (  45 )    kydsthgvfkgevkme--------dgaLvvdgkkItvfne-mkPenIpWs
1gado  (  45 )    kyDsthgrFdgtVevk--------dghLiVngkkIrVtae-rdPanLkWd
                  a           bbb           bbbb  bbbbbb     333    

                           110       120       130       140       150 
1hdgo  (  86 )    dlgVdfVIESTgvfrnrekAelHlqagAkkVIITApAkgediTVVigCne
1gd1o  (  86 )    eigVdIVVESTgrftkredAakHleagAkKVIISApAknediTIVmgVnq
1cero  (  86 )    eagVgVVIESTgvftdadkAkaHleggAkKVIITApAkgeditIVmgVnh
1gypa  ( 101 )    klgVdyVIESTglftdklkAeGHikggAkKVVISapAsggAkTIVmgVNq
1ggao  ( 100 )    klgVeYVIESTglftvksaAegHlrggArKVVISapAsggAktFVMgVnh
3gpdr  (  88 )    dagTayVVESTgvfttmekAgaHlkGgAkrIVISapSadap-mFVmGVnh
1gpdg  (  86 )    kagAeYIVESTgvfttiekAsaHfkggAkkVVISapSadap-mFVcGVnl
1gado  (  86 )    evgVdVVAEATglfltdetArkHitagAkkVVMTGpSkdntpMFVkgAnf
                       bbbb       aaaa aaaa    bbbb                3

                           160       170       180       190       200 
1hdgo  ( 135 )    dqLkpe-htIISCAsCTTNSIAPIVkVLhek-FgIvsgmLtTvHSytndQ
1gd1o  ( 135 )    dkYdpkahhVISNAScTTNCLAPFAkVLheq-fgIvrgmMtTvHSytndQ
1cero  ( 135 )    eaYdpsrhhiISNAscTTNSLAPVMkvLeea-FgVekAlMtTvHSytndQ
1gypa  ( 151 )    heYspashhVVSNASCTTNCLAPIVhVLtkenFgIetglMtTiHSyTatQ
1ggao  ( 150 )    nnYnpreqhVVSNAScTTNCLAPLVhVLvkegFgIstglMtTvHSytatq
3gpdr  ( 137 )    fkYans-lkiISNASCTTNCLAPLAkVIhdh-fgIveglMtTvHAiTatq
1gpdg  ( 135 )    ekYskd-mtVVSNAscTTnCLAPVAkVLhen-feIveglmtTvHAvtatq
1gado  ( 135 )    dkyagq--dIVSNAscTTNCLAPLAkVIndn-fgIieglMtTvhAttatQ
                  33       bbb   aaaaaaaaaaaaaaaa    bbbbbbbbb      

                           210       220       230       240       250 
1hdgo  ( 183 )    rvldlphkdlrraraa-avniIpttTgAakAValVVpeVkgkLdgmAiRv
1gd1o  ( 183 )    rildlphkdlrraraa-aesiIpTtTgAAkaValVLpeLkgkLngmAmRv
1cero  ( 183 )    rlldlphkdlrrarAa-ainiIpTttgAAkaTalVlpsLkgrFdgmAlrv
1gypa  ( 201 )    ktvdgvslkdwrgGraaavniIpstTgAakAVgmVipsTkgkLtgmSfrv
1ggao  ( 200 )    ktvdgvsvkdwrgGraaalniipsttgAAkaVgmVipsTqgkLtgmafrv
3gpdr  ( 185 )    ktvdspsgklwrggrGaaqnlipasTgAakAVGkVIpeLdgkltgmAfrv
1gpdg  ( 183 )    ktvdgpsakdwrggrgaaqniipSstgAakAVGkVipeLdgkltGmAfrv
1gado  ( 183 )    ktvdgpshkdwrGGrGasqniIpsstgAAkaVGkVLpeLngkLtgmafrv
                                       bbb   aaaaaaaa 333   bbbbbbb 

                           260       270       280       290       300 
1hdgo  ( 233 )    ptpDGSiTdLtVlVekeTtveeVnavMkeaTegrLkgiIgyndepivss-
1gd1o  ( 233 )    ptpNVSvVdLvAeLekeVtveeVnaaLkaAAegeLkgiLaysee-plvsr
1cero  ( 233 )    ptaTGSiSdItAlLkreVtaeeVnaaLkaaAegpLkgiLaytedeivlq-
1gypa  ( 251 )    ptpDVSvVdLtFrAtrdTsiqeIdkaIkkAAqtyMkgiLgftdeelvsa-
1ggao  ( 250 )    ptaDVSvVdLtFiAtrdTsikeIdaaLkrAsktyMkniLgytdeelvsa-
3gpdr  ( 235 )    ptaNVSvLdLtCrLekpAkyddIkkvVkeasegplkgiLgytedevvsd-
1gpdg  ( 233 )    ptpDVSvVdltVrLgkeCsyddIkaaMktasegplqgfLgYteddvvss-
1gado  ( 233 )    ptpNVSvVdLtVrLekaAtyeqIkaaVkaaaegeMkgVLgyteddvvst-
                       bbbbbbbb      aaaaaaaaaaaaa      bbbb        

                           310       320       330       340       350 
1hdgo  ( 282 )    dIigttfSGiFDatiTnV----iggklVkVASwYDNEyGYSNRVVdTLel
1gd1o  ( 282 )    dyngstvSSTIdAlsTmv----idgkmVkVvSwYDNEtGYShRVVdLAay
1cero  ( 282 )    dIvmdphSSiVDAklTkAl-----gnmVkVfAwYDNEwGYAnRVAdLVel
1gypa  ( 300 )    dFindnrSSVYdSkaTlqnNlpgekrfFkVvSwYDNEwAYShRVVdLVry
1ggao  ( 299 )    dFisdsrsSIYdSkaTlqnnlpnerrfFkIvSwYDNewGYShRVVdLVrh
3gpdr  ( 284 )    dFngsnhSSIFDAgagiel----ndtfVkLvSwYDNEfGYSeRVVdLMah
1gpdg  ( 282 )    dFigdnrSsIfdAkagiql----sktfVkVvSwYDNEfgYSqRVIdLLkh
1gado  ( 282 )    dFngevcTSvFDAkaGial----ndnfVkLvSwYDNEtGYSnKVLdLIah
                          bbbb     b        bbbbbbbb   aaaaaaaaaaaaa

                           360 
1hdgo  ( 328 )    Llkm      
1gd1o  ( 328 )    IAskgl    
1cero  ( 328 )    Vlrkgv    
1gypa  ( 350 )    MAakDaass 
1ggao  ( 349 )    MAarDraakl
3gpdr  ( 330 )    MaskE     
1gpdg  ( 328 )    Mqkvdsa   
1gado  ( 328 )    Isk       
                  aaa       


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