amino acid dehydrogenase
|
class : alpha beta |
number of structures : 8 |
average size : 415 |
average PID : 38
% |
PDB
code |
start
residue |
start
chain |
end
residue |
end
chain |
name |
source |
resolution |
R-factor |
1c1d
 |
1 |
A |
349 |
A |
L-phenylalanine dehydrogenase |
Rhodococcus sp. m4 |
1.25 |
19.30 |
1leh
 |
1 |
A |
364 |
A |
leucine dehydrogenase |
Bacillus sphaericus |
2.20 |
20.10 |
1gtm
 |
3 |
A |
419 |
A |
glutamate dehydrogenase |
Pyrococcus furiosus |
2.20 |
17.40 |
1bvu
 |
3 |
A |
418 |
A |
glutamate dehydrogenase |
Thermococcus litoralis |
2.50 |
19.20 |
1euz
 |
4 |
A |
419 |
A |
glutamate dehydrogenase |
Thermococcus profundus |
2.25 |
18.70 |
1b26
 |
4 |
A |
412 |
A |
glutamate dehydrogenase |
Thermotoga maritima |
3.00 |
22.50 |
1hwx
 |
1 |
A |
501 |
A |
glutamate dehydrogenase |
Bos taurus |
2.50 |
17.00 |
1bgv
 |
1 |
A |
449 |
A |
glutamate dehydrogenase |
Clostridium symbiosum |
1.90 |
17.30 |
|
pir |
ali |
malform |
joy-html |
colour postscript |
postscript |
superimposed coordinates
(RasMol)
|
10 20 30 40 50
1c1da ( 1 )
1leha ( 1 )
1gtma ( 3 ) adpyeiVikqLerAaqyM--eIs----------
1bvua ( 3 ) qdpfeiAvkqLerAaqym--dIs----------
1euza ( 4 ) idpfemAvkqLerAAqyM--dIs----------
1b26a ( 4 ) slyemAveqFnrAaslm--dLe----------
1hwxa ( 1 ) aDreddpnFfkMVegFFdrGasiVedkLvedlktrqtqe
1bgva ( 1 ) skyVdrViaeVekkyadepeFvqTVeeVLssLgpVVdahp----------
aaaaaaaaaaa
60 70 80 90 100
1c1da ( 1 ) sidsaln-wdgemtvtrfda-------mtgAhFVIRLdstqlgpA
1leha ( 1 ) meifkymekydYeqLvfCqde-------aSgLkAVIAIhdttLgpA
1gtma ( 24 ) --e----eAlefLkrpqrivevtIpVemddgsvkvftGFRVQHNwArgpT
1bvua ( 24 ) --e----eAlefLkrPqrivevsIpVemddgsvkvftGFRVQYNwArgpT
1euza ( 25 ) --e----eAlewLkkPmrivevsVpIemddgsvkvftGFRVQHNwArgpT
1b26a ( 24 ) --s----dlAevLrrpkrvliveFpVrMddghvevftGYRVQHnvargpA
1hwxa ( 40 ) qkrnrVrgILriIkpCnhvlslsFpirrddgswevIeGyRAQHShqRtpC
1bgva ( 41 ) --eYeevaLLerMViPerviefrVpWeddngkvhvntGyRVQFngaigpy
a aaaaaa bbbbbbbbbb bbbbbbbbbbbb b
110 120 130 140 150
1c1da ( 38 ) AGGTRAaqysnladALtdAGkLAgaMtlKMaVsnLpMGGGKSVIaLpapr
1leha ( 40 ) LGGArMwtYnaeeeAiedALrlArgmTykNAAAglnLGGGkTVIi--gdP
1gtma ( 68 ) KgGIrWhp----eEtlstVkalAAwmTWkTAVMdLpYgGGkGGIi--vdp
1bvua ( 68 ) KgGIrWhp----eEtlstVkalAAwmTWkTAVMdLpYgGGkGGVi--cnP
1euza ( 69 ) KGGIrWhp----aEtlStVkAlATwMTWkVAVVdLpYGGGkGGIi--VnP
1b26a ( 68 ) KGGIrYhp----dVtldeVkAlAFwmTWkTAVMnLpFGGGkGGVr--vdp
1hwxa ( 90 ) KGGIRYst----dVsvdeVkALASLMTYKCAVVdVpFGGAKAGVk--Inp
1bgva ( 89 ) KGGLrFap----sVnlSiMKFLGFeQAFKDSLTtlpMgGAKGGSd--Fdp
b bbb aaaaaaaaaaaaaaaaa bbbbbbbb
160 170 180 190 200
1c1da ( 88 ) hsIdpstwarILrIHAenIdk--lsg--nYwTGpDvnTnsadMdtLndtT
1leha ( 88 ) fadkn---edMFraLGrfIqg--lnG--rYITaedvgTtvddMdlIhqeT
1gtma ( 112 ) kkLsdrekerLArgYIraIyd--vIsPyeDIPapdvyTnpqIMawMMdeY
1bvua ( 112 ) keMsdrekerLArgYVraIyd--vIsPytDIPapdvyTnpqIMawMMdeY
1euza ( 113 ) kelsereqerLAraYIraVyd--vIgPwtDIPApdvyTnpkIMgwMMdeY
1b26a ( 112 ) kkLsrnelerLSrrFFseIqv--iIgpynDIPapdvnTnadVIawYmdty
1hwxa ( 134 ) knytdeDLekITrrFTmeLAkkgfIgpgvDVPApNmsTgerEMswIAdty
1bgva ( 133 ) ngksdreVmrFCqaFMteLyr--hIgpdiDVPAgdlgVgarEIgyMYgqY
aaaaaaaaaaaaaaa bb aaaaaaaaaaa
210 220 230 240 250
1c1da ( 134 ) e------------fVFGrslergGagsSaftTAVGVfeAMkaTVahrglg
1leha ( 131 ) d------------YVTgispafgssGnpspVtAyGVyrGMkAAAkeAfgs
1gtma ( 160 ) et-isrrktpAfGIITgKplsiGGSlgrieAtArGASyTIrEAAkvl---
1bvua ( 160 ) et-isrrkdpSfGVITgKppsvgGivArmdAtArGASyTVrEAAkal---
1euza ( 161 ) et-imrrkgpAfGVITGKplsiGGSlgrgtAtAqGAIFTIrEAAkAl---
1b26a ( 160 ) Sm-nvg--htvlgIVTgKpvelGGSkgreeAtGRGVkVCAglAMdvl---
1hwxa ( 184 ) astiGhydinAhACVTgKpisqGGIhgRiSATGrGVFhGIenFIenasYM
1bgva ( 181 ) rk-ivg--gfyngVLTgKarsfgGSlvrpeAtGyGSVYYVeaVMkhe---
a 333 aaaaaaaaaaaaaaaa
260 270 280 290 300
1c1da ( 172 ) -------sLdgltVLVqGLgaVGgsLaslAae-agAqL-lVADtd-----
1leha ( 169 ) ------dsLeglaVSVqgLgnvAkaLCkkLnt-egAkL-vVTdvn-----
1gtma ( 206 ) ---gwd-tLkgktIAIQgYgnaGyyLAkIMsedfgMkVVAVSDskgGIyn
1bvua ( 206 ) ---gm--dLkgktIAIQgYgnaGyyMAkIMseeygMkVVAVSDtkgGIyn
1euza ( 207 ) ---gi--dLkgkkIAVQgYgnaGyyTAklAkeqlgMtVVAVSDsrgGIyn
1b26a ( 204 ) ---gi--dpkkAtVAVqgFgnvGqfAAlLIsqelgSkVVAVSDsrgGIyn
1hwxa ( 234 ) siLgmtpgFgdKtFAVqGFgnVGlHSMrYLhr-fgAkCvAVGEsdgsIwn
1bgva ( 225 ) ---nd--tLvgktVALAgfgnvAwGAAkKLae-lgAkAVTLsgpdGYIyD
bbbbb aaaaaaaaaaaa bb bbb bb
310 320 330 340 350
1c1da ( 208 ) ------tervahaval---------------ghtavaledVlstpCdVFA
1leha ( 206 ) ------kaaVsaAvaeE--------------gAdavapnaIygvtCdIFA
1gtma ( 252 ) pdGLnAdeVlkwkneh-----gsVkdfp---gAtnitneeLLeleVdVLA
1bvua ( 251 ) pdgLnadeVlawkkkt-----gSVkdfp---gAtnitneeLLeleVdVLA
1euza ( 252 ) pdgLdPdeVlkwkreh-----gsVkdfp---gAtnitneeLLeleVdVLA
1b26a ( 249 ) pegFdVeeLIrykkeh-----gtVvtyp---kGeritneeLLeldVdILV
1hwxa ( 283 ) pdgIdPkeLedfklqh-----gtIlgFp---kAkiyeg-sIleVdCdILI
1bgva ( 269 ) peGItteekinyMleMrasgrnkVqdYAdkfgvqffpgekPWgqkVdIIM
aaaaaaaaa bb bbb
360 370 380 390 400
1c1da ( 237 ) PCAmggvIttevArtL---dCsVVAGAANnViadeaAsdiLhar-gIlYA
1leha ( 236 ) PCalgavLndftIpqL---kAkVIAGsAdnQlkdprHGkyLhel-givYA
1gtma ( 294 ) PAaieevItkknAdnI---kAkIVAEVangPV-tpeAdeiLfek-gilQI
1bvua ( 293 ) PSaieevItkknAdnI---kAkIVAELangPT-tpeAdeiLyek-giliI
1euza ( 294 ) PAaieevIteknAdnI---kAkIVAEVangPV-tpeAddiLrek-gIlQI
1b26a ( 291 ) PAalegaIhagNAerI---kAkAVVEGangPT-tpeAdeiLsrr-gilVV
1hwxa ( 324 ) PAAsekqLTksnAprV---kAkIIAEGANgPT-TpqADkiFler-nIMvI
1bgva ( 319 ) PCatqndVdleqAkkIvannVkYYIEVanmPT-tneAlrfLmqqpnMVVA
b bbb aaaaaaaaa bbb
410 420 430 440 450
1c1da ( 283 ) PdFVANAGGAIhLVGrevl-------------------------------
1leha ( 282 ) PdyVINAGgvINvAD-ELy-------------------------------
1gtma ( 339 ) PDFLCnAGgvTVsyFEwvQNitg---------------------------
1bvua ( 338 ) PDFLCnAGgvTVsyFEwvQNitg---------------------------
1euza ( 339 ) PdfLCnAGgVTVsyFEWvQNing---------------------------
1b26a ( 336 ) PdILAnAGgvTVsyFEwvQDlqs---------------------------
1hwxa ( 369 ) PDLYLNAGGVTVSyfQIlKNlnhvsygrltfkyerdsnyhllmsvqesle
1bgva ( 368 ) pSKAVnAGgVLVSGFEmsQnser---------------------------
aaaa aaaaaaaaaaaaaa
460 470 480 490 500
1c1da ( 302 ) ------------------------gwsesvVherAv-aIgdtLnqVFeiS
1leha ( 300 ) ------------------------gYnrtrAmkrVd-gIydsIekIfais
1gtma ( 362 ) -----------------------yywtieeVrerLdkkMtkAFydVyniA
1bvua ( 361 ) -----------------------dywtveeTrakLdkkMtkAFwdVynth
1euza ( 362 ) -----------------------yywteeeVrekLdkkMtkAFweVyntH
1b26a ( 359 ) -----------------------ffwdldqVrnaLekmMkgAFndVmkvk
1hwxa ( 419 ) rkfgkhggtipivptaefqdrIsgasekdiVhsgLaytMerSArqImrtA
1bgva ( 391 ) -----------------------lswtaeeVdskLhqvMtdIHdgSaaaA
aaaaaaaaaaaaaaaaaaaaaaa
510 520 530 540
1c1da ( 327 ) dndg--vtPdeAArtLAgrrareas
1leha ( 325 ) krdg--vpsyvAAdrmAeeriakvakarsqflqdqrnIlngr
1gtma ( 389 ) kekn--ihMrdAAYVvAVqrVyqaMldrgwVkh
1bvua ( 388 ) kekn--InMrdAAYvvAVsrVyqaMkdrgwIkk
1euza ( 389 ) kdkn--ihMrdAAyVvAVsrVyqaMkdrgwVkk
1b26a ( 386 ) ekyn--vdMrtAAyIlAIdrVAyatkkrg
1hwxa ( 469 ) mkynlgLdLRTAAYVnAIekVFrvyneagvtft
1bgva ( 418 ) eryglgynLvAGANIvGFqkIAdammaqgi-aw
aa aaaaaaaaaaaaaaaaaaa