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Align your sequence(s)

Sm protein

class : all beta number of structures : 4 average size : 76 average PID : 20 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1d3b rasmol 7 B 87 B small nuclear ribonucleoprotein associated proteins B (snRNP-b) Homo sapiens 2.00 21.3
1b34 rasmol 26 B 118 B small nuclear ribonucleoprotein Sm D2 (snRNP core protein D2) Homo sapiens 2.50 24.9
1b34 rasmol 2 A 81 A small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) Homo sapiens 2.50 24.9
1d3b rasmol 4 A 75 A small nuclear ribonucleoprotein Sm D3 (snRNP core protein D3) Homo sapiens 2.00 21.3
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Sm  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1d3bb  (   7 )        skmlqhi--dyrMrCilqdgrifiGTFkafdkhmnLiLcdCdEfrk
1b34b  (  26 )    tgplsvLtqSvknntqVlInCrnnkkLlGrVkafdrhcnMvLenVkem--
1b34a  (   2 )     klvrflmkLs--hetVtIelkngTqVhGtItgVdvsmnThLkaVkmtlk
1d3ba  (   4 )    gvpikvLheAe--ghiVtCetntgevyrgkLieAednmnCqMsnItVtyr
                    aaaaaa       bbbbbb    bbbbbbbbb     bbbbbbbbb  

                           60        70        80        90  
1d3bb  (  51 )    ikpknskqaereekrvlglvllrGenLvsMtvegppp      
1b34b  (  93 )    -------------dryiskmflrGdsVivVlrnplia----gk
1b34a  (  49 )    n----------repvqletlsIrGnnIryfilpdsLpldtllv
1d3ba  (  52 )    d----------grvaqleqvyirGckIrflilpd         
                                bbbbbbbb 333bbbbb            


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