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Align your sequence(s)

Levivirus coat protein

class : alpha plus beta number of structures : 4 average size : 125 average PID : 47 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1una rasmol 2 A 130 A coat protein Bacteriophage ga 2.80 20.4
1msc rasmol 1 - 129 - coat protein Bacteriophage ms2 2.0 20
1frs rasmol 1 A 129 A coat protein Bacteriophage fr 3.5 N/A
1qbe rasmol 1 A 132 A coat protein Bacteriophage q-beta 3.5 30.4
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : Levi_coat  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1unaa  (   2 )    a-tlhsfvlvdng--gtgnvtVvpvsn-a-ngvaewlSn-nsrsqAyrvt
1msc   (   1 )    asnftqfvlvdng--gtgdvtVapsnfa--ngvaewiSs-nsrsqaykvt
1frsa  (   1 )    asnfeefvlvdng--gtgdvkVapsnf-a-ngvaewiSs-nsrsqAykvt
1qbea  (   1 )    a-kletvtlgnigkdgkqtlvLnprgvnptngvaslSqagavpalEkrvt
                        bbbb         bbbbbbb       bbbb          bbb

                           60        70        80        90        100 
1unaa  (  46 )    asyrasgadkrkytiklevpki-------velpvsawkayasidltipif
1msc   (  46 )    csvrqssaqnrkytikvevPkvatqtvggvelpvaarrsylnmeltipif
1frsa  (  46 )    csvrqssannrkytvkvevPkvatqvqggvelpvaawrsymnmeltipvf
1qbea  (  50 )    vsvsq---pnykvqvkiqnPtact------cdpsvtrqayadvtfsftqy
                  bbbb     bbbbbbbbbbb                 bbbbbbbbbbb  

                           110       120       130   
1unaa  (  96 )    aatddvtvisksltglfkvgnpiaeaissqsgfya
1msc   (  96 )    atnsdcelivkamqgllkdgnpipsaiaansgiy 
1frsa  (  96 )    atnddcalivkalqgtfktgnpiataiaansgiy 
1qbea  ( 100 )    stdeerafvrtelaallas-pllidaidqlnpay 
                    aaaaaaaaaaaaaa     aaaaaaa       


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