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Align your sequence(s)

Cobalamin (vitamin B12)-binding domain

class : alpha beta number of structures : 4 average size : 149 average PID : 32 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1be1 rasmol 1 - 137 - glutamate mutase (B12-binding subunit) Clostridium tetanomorphum N/A N/A
1b1a rasmol 1 - 137 - glutamate mutase (B12-binding subunit) Clostridium cochlearium N/A N/A
7req rasmol 561 A 728 A methylmalonyl-CoA mutase alpha-subunit Propionibacterium freudenreichii shermanii 2.2 18.3
1bmt rasmol 741 A 896 A methionine synthase, C-terminal domain Escherichia coli 3.0 17
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : B12-binding  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1be1   (   1 )                                      mekktiVlgviGsdch
1b1a   (   1 )                                      mekktIVlGVigsdch
7reqa  ( 561 )    aqirtisgvyskevkntpeveeArelVeeFeqaegrrPrILLAKMgqdgh
1bmta  ( 741 )                                  eqg-ktngkMVIATVkgDvh
                                                        bbbbb       

                           60        70        80        90        100 
1be1   (  17 )    avgnkiLdhSftnagfnvvnIgvlSsqedfinaAieTkAdLICVsSlygQ
1b1a   (  17 )    avgnkildhaftnagfnVvnigvlspqevFikaaieTkAdAIlLSSlygq
7reqa  ( 611 )    drgQkviATAYadLgFdVdvGplfQtpeeTArqAveadVhVVgVsslagg
1bmta  ( 760 )    digKnivgvvLqcnnYeIvdlgvmVpaekILrtAkevnAdLIGLsGlitp
                                  bbbb        aaaaaaaa    bbbbbb    

                           110       120       130       140       150 
1be1   (  67 )    geidckglreKcdeaglkGikLFVGgNivvgkqnwpdvEqrfkamGfDrv
1b1a   (  67 )    geiDCkGLrqkcdeaglegiLLYVGgNivvgkqhwpdvekrfkdmgyDrV
7reqa  ( 661 )    HltlVpaLrkeLdklgrpdIlITVgg--vIpeqdfd-eLrkd---gAveI
1bmta  ( 810 )    SldeMvnVAkeMerqg-ftipLLIgga-tTskahTAvkIeqnY-sgpTVy
                  aaaaaaaaaaaaa       bbbbbb              aa      bb

                           160       170       180       190 
1be1   ( 117 )    YppgtspetTiaDmkeVlgve                      
1b1a   ( 117 )    yApgtppevGIadLkkDlnie                      
7reqa  ( 705 )    ytpgtviPeSAisLVkkLraslda                   
1bmta  ( 857 )    vq---nasrTvgvVaaLlsdtqrddfvartrkeYetvriqhgr
                          aaaaaaaa                           


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