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Align your sequence(s)

Bromodomain

class : all alpha number of structures : 4 average size : 120 average PID : 34 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1eqf rasmol 1359 A 1497 A bromodomain module from TafII250 Homo sapiens 2.10 21.8
1eqf rasmol 1498 A 1625 A bromodomain module from TafII250 Homo sapiens 2.10 21.8
1f68 rasmol 730 A 832 A bromodomain from gcn5 Homo sapiens N/A N/A
1e6i rasmol 329 A 438 A transcriptional activator gcn5 Saccharomyces cerevisiae 1.87 18.7
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : bromodomain  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                            10        20        30        40        50  
1eqfa1  (1359 )    gttvhcdylnrphksihrrrtdpmVtLssiLesIIn-dMrdlpnTypfht
1eqfa2  (1498 )                     llddddQvaFSfiLdnIVtqkMmavpdSwpfhh
1f68a   ( 730 )                           gdqlyttLknLLa-qIkshpsAwPfme
1e6ia   ( 329 )                           rgphdaaIqnILt-eLqnhaAAwPFlq
                                            aaaaaaaaaaa aaa     333  

                            60        70        80        90        100 
1eqfa1  (1408 )    pvnakvvkdyykiItrpMDLqtLrenVrkrlYpsreeFrehLelIvknSa
1eqfa2  (1531 )    pvnkkfvpdyykvIvnpmDLetIrknIskhkYqsresFlddVnlIlaNSv
1f68a   ( 756 )    pvkkseapdYyevIrfpIdLktMterLrsryYvtrklFvaDLqrVIaNCr
1e6ia   ( 355 )    pvnkeevpdYydfIkepmDLstMeikLesnkYqkMedFIyDArlVFnnCr
                            aaaa      aaaaaaaaa      aaaaaaaaaaaaaaaa

                            110       120       130       140   
1eqfa1  (1458 )    tyngpkhsltqiSqsMldlCdeklkekedkLarlekainp     
1eqfa2  (1581 )    kyngpesqytktAqeIVnvCyqTLteydehLtqlekdIctakeaa
1f68a   ( 806 )    eynppdseycrcAsaLekfFyfklkeg                  
1e6ia   ( 405 )    myngentsyykyAnrLekfFnnkVkeip-eyshli          
                   aa     aaaaaaaaaaaaaaaaaaa                   


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