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Align your sequence(s)

ATP synthase

class : multi domain number of structures : 4 average size : 481 average PID : 36 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1mab rasmol 1 B 477 B ATP synthase beta chain, mitochondrial Rattus norvegicus 2.80 21.7
1mab rasmol 10 A 510 A ATP synthase alpha chain, mitochondrial Rattus norvegicus 2.80 21.7
1sky rasmol 1 E 470 E ATP synthase beta chain Bacillus ps3 N/A 22.2
1sky rasmol 21 B 502 B ATP synthase alpha chain Bacillus ps3 N/A 22.2
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : ATP-synt_ab_N  ATP-synt_ab_C  ATP-synt_ab  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1mabb  (   1 )             saapkagtatGqIvavigaVVdVqF-deglPpilnaLeVqg
1maba  (  10 )    ssileerigadtsvdleeTGrVlsigdgIArVhgLr--nVqaeEMVeFss
1skye  (   1 )                    mtrGrViqvmgpVVDVkFenghlPaiynALkIqh
1skyb  (  21 )               sqiqvsdvGtViqvgdGiArAhgLd--nVmsgEaVeFan
                                    bbb  bbb  bbb             bbbb  

                           60        70        80        90        100 
1mabb  (  41 )    re-------srLVLEVaqhlgestVrTiAMdgtegLvrgqkVlDsgapIk
1maba  (  58 )    ----------glkGMSLnlep-dnvGVVVFgndklIkegdiVkrtgaiVd
1skye  (  35 )    karnenevdidLtLEValhlgddtVrTIAMastdgLirgMeViDtgapIs
1skyb  (  58 )    ----------avmGmAlnlee-nnvGIVILgpytgIkegdeVrrtgriMe
                              bbbbbbbb   bbbbbb           bbbb     b

                           110       120       130       140       150 
1mabb  (  84 )    IPVGpeTLgriMnViGepiDergpIkTk-qfapIhaeapefiemsveqei
1maba  (  97 )    VpVGdeLlgrVVdAlGnaidgkgpvgSk-irrrvglkapgiiprisvrep
1skye  (  85 )    VPVgqvTlgrvFnVlGepidlegdIpadarrdpIhrpaPkfeelatevei
1skyb  (  97 )    VpVgetLigrvVnPlGqpvdglgpVett-etrpIesrapgvmdrrsvhep
                  bb        bb                  bbb                 

                           160       170       180       190       200 
1mabb  ( 133 )    lvTgIkvVDlLAPYAkGGkIGLFGGagVgKtvLImELinnvAkah-----
1maba  ( 146 )    MqTGIKAVDSLVPIGRGQrELIIGDrqTgktsIAIdTIINQkrfNdgtde
1skye  ( 135 )    LeTGIKVVDLLAPYikGgKIGLfggagVgktvLIQELIhNIAqeh-----
1skyb  ( 146 )    LqTGIKAIDAlVpIGrGQrELIIGdrqTgktsvAIdTIInQkdq------
                       aaaa           bbbb     aaaaaaaaaa           

                           210       220       230       240       250 
1mabb  ( 178 )    --ggySVFAGVGertreGndLyhemiesgvInlkdatskVALVyGQmnep
1maba  ( 196 )    kkkLyCIYVAIgqkrstVaqlvkrLtdadAM------kyTIVVSATasda
1skye  ( 180 )    --gGiSVFAGVGertregndlyheMkdSgVi------skTAMVfGqmnep
1skyb  ( 190 )    --nMiCIYVAIGqkestVatvvetLakhgAp------dyTIVVTAsasqp
                       bbbbbb   aaaaaaaaaaaaa            bbbbbb     

                           260       270       280       290       300 
1mabb  ( 226 )    pGArarVALTGLTVAeyFRdqegqdVLLFIDNIFrfTqAgsevSalLgri
1maba  ( 240 )    APlqyLAPySGCSMGEyFRdn-gkhALIIYDdLskQAvaYrqMSllLrrp
1skye  ( 222 )    pGArMrVAlTGLTMAEyFRdeqGqdgLLFIdNIfrFTqAGseVSalLgrm
1skyb  ( 232 )    APLlfLAPYAGVAMGEyFMim-gkhVLVVIDDLskQAaaYrqLSllLrrp
                  aaaaaaaaaaaaaaaaaaa      bbbbbb  aaaaaaaaaaaaa    

                           310       320       330       340       350 
1mabb  ( 276 )    psavgyQptlatdMgtMQeRIttTk----kgsItSVQAIyVpaddltdpA
1maba  ( 289 )    pgreayPgdVfyLHsrLLeRAAKMndsfggGSLTALPVIeTqagdvsayI
1skye  ( 272 )    psaigyQptlateMgqLQeRItsta----kGSITSIQaIyvpaddytdpA
1skyb  ( 281 )    pgreayPgdIfyLHsrLLeRAAKLsdakggGSLTaLPFVeTqagdisayi
                           aaaaaaaaa              bbbbbbbb          

                           360       370       380       390       400 
1mabb  ( 322 )    PatTfahLdATTvLsraiaelgIyPAVdpldStSrImdpniVgsehydvA
1maba  ( 339 )    ptnVisiTdGqIFLetelfykgirpAInvglSvsrvg-saAqtrAMkqVA
1skye  ( 318 )    PatTfshLdAtTnLerklAemgIyPAVdplvStSrAlapeiVgeeHyqvA
1skyb  ( 331 )    ptnVisITdGqIfLqsdlffsgvrpAInaglSvSrvG-gaAqikAMkkVA
                  aaaaa     bbb  aaaa                        aaaaaaa

                           410       420       430       440       450 
1mabb  ( 372 )    rgVqkILqdYkslqdiiailgmdelseedklTvsrArKIqRFlsQpFqva
1maba  ( 388 )    gtMklelaqyrevaafaqf--gsdldaatqqllsrGvrlteLlkqgqy--
1skye  ( 368 )    rkVqqtLerYkelqdiiailgmdelsdedklvVhrArRIqfFLSQnFhVa
1skyb  ( 380 )    gtLrldlaayrelefaqfs--d---dkatqanvarGarTveVlkQdlh--
                  aaaaaaaaaaaaa              aaaaaaaaaaaaaaaa       

                           460       470       480       490       500 
1mabb  ( 422 )    evftghmgklvplketikGfqqIlagdyDhlpeqaFymvgpIeeAvakad
1maba  ( 434 )    --------spmaieeQVaVIYAgvrgyLdklepskItkFesaFlshvvsq
1skye  ( 418 )    eqftgqpGsyVpvkeTVrGFkeIleGkydhLpedrFrlvGrIeeVvekak
1skyb  ( 426 )    --------qpipvekQVLIIYALTrgfLddipvedVrrFekeFylwLdqn
                              aaaaaaaaaaaa        333       aaaaaaa 

                           510       520       530   
1mabb  ( 472 )    ----------klaee-------------------h
1maba  ( 476 )    hqsllgnirtdgkIseqsdaklkeiVtnflagfep
1skye  ( 468 )    am--------------------------------g
1skyb  ( 468 )    GqhLlehIrttkdLpneddlnQaieAfkKTfvvsq
                                                     


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