glycosyl hydrolase family 1
|
class : alpha beta barrel |
number of structures : 8 |
average size : 445 |
average PID : 38
% |
PDB
code |
start
residue |
start
chain |
end
residue |
end
chain |
name |
source |
resolution |
R-factor |
1cbg
 |
1 |
- |
490 |
- |
cyanogenic beta-glucosidase |
Trifolium repens |
2.15 |
19.50 |
1e73
 |
3 |
M |
333 |
M |
myrosinase |
Sinapis alba |
1.50 |
13.40 |
1hxj
 |
6 |
A |
495 |
A |
beta-glucosidase |
Zea mays |
2.05 |
16.80 |
1ug6
 |
4 |
A |
429 |
A |
beta-glycosidase |
Thermus thermophilus |
0.99 |
12.10 |
1gnx
 |
15 |
A |
477 |
A |
beta-glucosidase |
Streptomyces sp. |
1.68 |
19.00 |
1e4i
 |
2 |
A |
448 |
A |
beta-glucosidase |
Bacillus polymyxa |
2.00 |
21.00 |
1qox
 |
2 |
A |
450 |
A |
beta-glucosidase |
Bacillus circulans |
2.70 |
25.50 |
1qvb
 |
1 |
A |
481 |
A |
beta-glycosidase |
Thermosphaera aggregans |
2.40 |
21.00 |
|
pir |
ali |
malform |
joy-html |
colour postscript |
postscript |
superimposed coordinates
(RasMol)
|
10 20 30 40 50
1cbg ( 1 ) fkplpisfddfsd-LnrscFapgFvFGTASSAfQYeGaAfedgkgpS
1e73m ( 3 ) eitcqenlpftcgntdalnsssfssdfifgvasSAyqiEGti---gRglN
1hxja ( 6 ) qmlsp-----sei-PqrdwFpsdFtFGAATSAyQIEGawnedgKgeS
1ug6a ( 4 ) nae-------kflwGVATSAYQIEGAtqedgRgpS
1gnxa ( 15 ) alt---FpegFlWGSATASYQIEGAAaedgRtpS
1e4ia ( 2 ) tifq---FpqdFMWGTATAAYQiEGayqedgRglS
1qoxa ( 2 ) sihm---FpsdFkWGVATAAYQIEGaynedgRgmS
1qvba ( 1 ) mkFpkdFMIGYSsSPfQFEaGipgSedpnS
bbbbb aaaa
60 70 80 90 100
1cbg ( 47 ) iWdtFThkyp----ekIkdrtnGdvAIdEyhrykeDIgiMkdMnLdAYRF
1e73m ( 50 ) IwDgFThrypn---kSgpdhgngdttcdSfsywqkdIdvLdelnAtGYrF
1hxja ( 47 ) NWDhFChnhp----erIldgsnSdiGAnSYhmyktDVrlLkeMgMdAYRF
1ug6a ( 32 ) IWdaFAq-rp----gaIrdgstGepACdHYrryeeDIalMqsLgVrAYRF
1gnxa ( 46 ) IWDtYAr-tp----grVrngdtGdvATdHyhrwreDValMaeLgLgAYRF
1e4ia ( 34 ) IWDtFAh-tp----gkVfngdnGnvACdSYhryeeDIrlMkeLgIrTYRF
1qoxa ( 34 ) IWDtFAh-tp----gkVkngdnGnvACdSYhrVeeDVqlLkdLgVkVYRF
1qvba ( 31 ) DWwvWVhdpeNtaaglVS-gdfPenGPGywnlnqnDHdlAekLgVnTIRV
aaaaaa aaaaaaaaaaaaaa bbbb
110 120 130 140 150
1cbg ( 93 ) SISWPRVLpkGklsg---------------------------gvnreGin
1e73m ( 97 ) SIAWSRIIprGkrsr---------------------------gvnekGId
1hxja ( 93 ) SISWPRILpkGtkeg---------------------------ginpdGik
1ug6a ( 77 ) SVAWPRIlPeGrg-----------------------------rinpkGla
1gnxa ( 91 ) SLAWPRIQptGrg-----------------------------palqkGLd
1e4ia ( 79 ) SVSWPRIFpnGdg-----------------------------evnqkGLd
1qoxa ( 79 ) SISWPRVLpqGtg-----------------------------evnraGLd
1qvba ( 80 ) GVEWSrIFpkpTfnvkVpverdengSIvhVdVddkaVerLdelAnkeAVn
b aaaa aaaaa
160 170 180 190 200
1cbg ( 116 ) YYnnLIneVlangMqPYVTLFHwDVPqaLed--ey---------rGFlgr
1e73m ( 120 ) yYhgLIsgLikkgItPfVTLFhwDLPqtLQd--ey---------eGFldp
1hxja ( 116 ) yYrnLInlLlengIePYVTIFHWDVPqaLee--ky---------gGFlDk
1ug6a ( 98 ) fYdrLVdrLlasgItPFLTLYHWDLPlalee--r----------gGWrsr
1gnxa ( 112 ) FYrrLAdeLlakgIqPVATLYHWDLPqeLen--a----------gGWPer
1e4ia ( 100 ) YYhrVVdlLndngIePFCTLYHWDLPqalqd--a----------gGWgnr
1qoxa ( 100 ) YYhrLVdeLlangIePFCTLYHWDLPqaLqd--q----------gGWgsr
1qvba ( 130 ) hYveMYkdWvergrkLILNLYHwPLPlwLHnPimVrrmgpdrApsGWLne
aaaaaaaaaaa bbbbbbb aaaa 333
210 220 230 240 250
1cbg ( 155 ) ---nIvddFrdYAelCFkeFGdrVkhWITLNePwGvSmnAYAyGt--fAp
1e73m ( 159 ) ---qIiddFkdYAdLCFeeFGdsVkyWLTINqLySvPtrGYgsAl--dAP
1hxja ( 155 ) shksIvedYtyFAkVCFdnFgdkVknWLTFNePqtFTSfSYGtGv--FAp
1ug6a ( 136 ) ---eTAfAFaeYAeaVAraLAdrVpfFATLNEPwCsAFlGHwtGe--HAP
1gnxa ( 150 ) ---aTAerFaeYAaiAAdaLgdrVkTWTTLNePwcsAFlGYGsGv--hAp
1e4ia ( 138 ) ---rTIqaFVqFAetMFreFhgkIqhWLTFNEPwcIAFlSNmlgv--hAp
1qoxa ( 138 ) ---iTIdAFaeYAelMFkeLGgkIkQWITFNePwcMAFlSNylGv--hAp
1qvba ( 180 ) ---eSVVEFAKYAAYIAwkMgelPvmWSTMNePNvvYeqGYmfvkgGfPP
aaaaaaaaaaaaaaaaa bbbbbb aaaaaaaaa
260 270 280 290 300
1cbg ( 200 ) GrÇSdwlklnÇtgGdSGrePYlAAHyQLLAHAAAArlYktkyqasqnGiI
1e73m ( 204 ) GrÇsptvdpsÇyaGnsstepyiVAhhQLlAHAkVVdlYrknyt-hQgGkI
1hxja ( 203 ) GrÇspgldÇAyptgnSlvePYtAGHNILLAHAeAVdlYnkhykrd-dTrI
1ug6a ( 181 ) Glr------------nleAALrAAHHLLLGHGlAVeaLraagA----rrV
1gnxa ( 195 ) Grt------------dpvaALrAAHHLNLGHGlAVqaLrdrLp--adAqC
1e4ia ( 183 ) Glt------------nlqtAIdVGHHLLVAHGlSVrrFrelgT---sgqI
1qoxa ( 183 ) Gnk------------dLqlAIdVSHHLLVAHGrAVtlFrelgi---sgeI
1qvba ( 227 ) gyl------------sleaAdkArrNMIQAHARAydNIkrfsk----kpV
aaaaaaaaaaaaaaaaaaaaaa bb
310 320 330 340 350
1cbg ( 250 ) GITLvShwfepas-kekadvdAakrgLdfMLGWFMhPLtkGrYPesMryl
1e73m ( 253 ) GPTMitrwflpyndtdrhsiaatermkefFlgWFmgPLtnGtYpqiMidt
1hxja ( 252 ) GLAFdVmGRvpyg-tsfldkqAeerSwdiNLGWFLePVvrGdYPfsMrsl
1ug6a ( 215 ) GIVLnFapAyge------dpeAvdvAdrYhNrfFLDPILgkgyPesPFr-
1gnxa ( 231 ) SVTLnIhhVrplt-dsdadadAvrrIdALAnrVFTgPMlqgaYpedLvkd
1e4ia ( 218 ) GIAPnVswAvpys-tseeDkaACaRtiSLhSDWFLqPIyqgsYPqfLvdw
1qoxa ( 218 ) GIAPnTswAvpyr-rtkeDmeAClrvNGwSGDWYLDPIyfgeYPkfMldw
1qvba ( 261 ) GLIYaFqwFelle-g---paevfdkfksskLYyFTDiVskGssiinv---
bbbbb bb aaaaaaaaaaaaaa aaaaaaaaa aaaaaa
360 370 380 390 400
1cbg ( 299 ) Vrk--rLpkFsteeskeLtgSfdFLGLNYySSyyAakapripnarp-AIq
1e73m ( 303 ) Vge--rLpsFspeesnlVkgSydflglnyyftq
1hxja ( 301 ) Are--rLpfFkdeqkekLagSynMLGLNYyTSrfSknidispnyspvlNt
1ug6a ( 258 ) ---dpppvpilsrDlelVarpLdFLGVNYyaPvrVapgt-----------
1gnxa ( 280 ) TagltdWsFvrdgDlrlAhQkLdfLGVNYysPtlVsa-h-------spwP
1e4ia ( 267 ) FaeqgAtVpiqdgDmdiIgepIdMIGINYysMsvNrfnp---------ea
1qoxa ( 267 ) YenlgykPpivdgDmelIhqpIdFIGINYytSsmnrynp-------geaG
1qvba ( 304 ) ------------eyrrdLAnrLdWLGVNYySrlvYkivd---dkPiilhg
aaaaa bbbbb bbbb
410 420 430 440 450
1cbg ( 346 ) tdslinatfeh-ngkpLgpmAAsswLCIyPqGIrkLLlyVknhYnnpvIy
1e73m
1hxja ( 349 ) dDAyAsqevnGpdgkpIgppMgNpwIymypeGLkdLLmiMknkygnppIY
1ug6a ( 294 ) gtlpVrylp------pegpaTaMg-wEvypeGLyhLLkrLgreV-pwpLY
1gnxa ( 338 ) gAdrVafhq------ppgetTaMg-wAvdpsGLyeLLrrLssdfpalpLv
1e4ia ( 308 ) gflqSeein------mglpvTdIg-wpvesrGLyeVLhyLq-kYgnidIY
1qoxa ( 310 ) gmlsSeais------mgapkTdig-weiyAeGLydLLryTAdkYgnptLY
1qvba ( 339 ) yGflCtpggiSpa---enpCSdfG-wEVypeGLylLLkeLynrYg-vdLI
bb aaaaaaaaaaaa bb
460 470 480 490 500
1cbg ( 395 ) ITENGrNefndp--tlslqeslldtpRidYYyrHLyyVlTAigdgVnVkG
1e73m
1hxja ( 399 ) ITENGIGdvdtketplpmeaAlnDykRlDYIqrHIaTLkeSidlgSnVqG
1ug6a ( 336 ) VTENGAAypDl----wtgeavVedpeRvaYLeaHVeAAlrAreegvdLrG
1gnxa ( 381 ) ITENGAAfhDy----adpegnVnDpeRiaYVrdHLaaVhrAikdgSdVrG
1e4ia ( 350 ) ITENgACInde----vvn-gkVqDdrRisYMqqHLvqVhrTihdglhVkG
1qoxa ( 353 ) ITENGACYndg----lsldgrIhDqrRidYLAmHLiqASrAiedgInLkG
1qvba ( 384 ) VTENGVSDs-------------rDalRpAYLVSHVySVwkAanegipVkG
bbb aaaaaaaaaaaaaaaaaaa bbb
510 520 530 540 550
1cbg ( 443 ) YFAWSLFDNMeWdsGytVrFGLVfVdfknnlkRhpKlSAhwFksFLk---
1e73m
1hxja ( 449 ) YFAWSLLDNFewfaGfteRYGIVYVdrnnnCtRymKeSAkwLkeFNt
1ug6a ( 382 ) YFVWSLMDNFEWafGytrrFGLYYVdfps-qrRIpKrSAlwYreriara
1gnxa ( 427 ) YFLWSLLDNFeWahGyskrFGAVyVdypt-gtRipKaSArwYaeVArtgv
1e4ia ( 395 ) YMAWSLLDNFEWaeGynmrFGMIHVdfrt-qvRtpKqSYywYrnVVsnnw
1qoxa ( 399 ) YMEWSLMDNFeWaeGygmrFGLVHVdydt-lvRtpKdSFywYkgVIsrgw
1qvba ( 421 ) YLHWSLTDNYeWaqGfrQkFGLVmVdfkt-kkrylrpSAlvFreIAthnG
bbbb 333 bbb bbb aaaaaaaaaa
560
1cbg ( 490 ) ----k
1e73m
1hxja
1ug6a
1gnxa ( 476 ) Lp
1e4ia ( 444 ) Letrr
1qoxa ( 448 ) Ldl
1qvba ( 470 ) IPdelqhltliq