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Align your sequence(s)

LuxS protein

class : alpha plus beta number of structures : 4 average size : 149 average PID : 43 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1j98 rasmol 4 A 157 A autoinducer-2 production protein LuxS Bacillus subtilis 1.20 12.6
1j6x rasmol 2 A 151 A autoinducer-2 production protein LuxS Helicobacter pylori j99 2.38 21.9
1j6w rasmol 3 A 163 A autoinducer-2 production protein LuxS Haemophilus influenzae 2.10 21.3
1inn rasmol 6 A 156 A LuxS Deinococcus radiodurans 1.80 20.6
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : LuxS  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1j98a  (   4 )      vesfeldhnaVvAPYVrhCgvhkvgtdgvvNkFDIRFcqPnkqaMkpd
1j6xa  (   2 )    knveSfnldhtkVkAPYVriAdrkkgvngdliVkYDVRFkqPnrdh--dp
1j6wa  (   3 )     lldsfkVdhtk-nAPAVRiakt-ltpkgdniTvFDLRFCiPnkeilspk
1inna  (   6 )     nvesfdLdhtkVkAPYVRlagvkttpkgdqiSkYDLRFlqPnqgaIdpa
                     3333         bbbbbbbbb     bbbbbbbb          aa

                           60        70        80        90        100 
1j98a  (  52 )    TihTLehLLafTIrshaekydhFdIidIspMgqTGYyLvVsgeTtsaeIV
1j6xa  (  53 )    SLhSLEHLVAeiIrnhAn-----yVvdWspgcqTGFYLtVlnhdnyteIl
1j6wa  (  52 )    GihTLEHlFAgf-rdhLng-dsieIidIspgcrtGFy-sLigtPneqkVs
1inna  (  55 )    AIhTLehLLagy-rdhle-----gVvdVspgcrTG-y-avigepdeqgV-
                  aaaaaaaaaaa             bbbbb     bbb bbb    aaaaa

                           110       120       130       140       150 
1j98a  ( 103 )    dLLedTMkeAveit---eipaanekqCgqaklHdleGAkrlMrfWlsqd-
1j6xa  (  99 )    evLekT-qdVlkak---eVpasnekqCgwaanhtlegAqnlAraFldk--
1j6wa  ( 102 )    eaWlaS-qdVlgvqdqasIpelniyqCgsyteHsLedAheiAknViargI
1inna  ( 101 )    kaFeaALkdTaghdq--pipgvseleCgnyrdHdlaaArqhArdVldqgL
                  aaaaa                             aaaaaaaaaaaaa   

                           160 
1j98a  ( 149 )    ---keeLlkvfg
1j6xa  ( 144 )    ---raeWsevg 
1j6wa  ( 152 )    gvNknedLsldn
1inna  ( 149 )    kvqe--till  
                              


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