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Align your sequence(s)

C-type lectin

class : alpha plus beta number of structures : 8 average size : 126 average PID : 27 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1esl rasmol 1 - 120 - lec domain E-selectin Homo sapiens 2.00 16.40
1rdo rasmol 115 1 225 1 mannose-binding protein-c Rattus rattus 1.70 20.1
1msb rasmol 107 A 221 A mannose-binding protein Rattus rattus 2.30 17.60
1tn3 rasmol 45 - 181 - tetranectin (plasminogen-kringle 4 binding protein) Homo sapiens 2.0 21.5
2afp rasmol 1 A 129 A sea raven type ii antifreeze protein Hemitripterus americanus N/A N/A
1qdd rasmol 1 A 144 A lithostathine 1 alpha Homo sapiens 1.30 N/A
1ixx rasmol 1 A 129 A coagulation factor IX/factor X-binding protein A chain Trimeresurus flavoviridis 2.5 17.8
1ixx rasmol 1 B 123 B coagulation factor IX/factor X-binding protein B chain Trimeresurus flavoviridis 2.5 17.8
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
SMART : CLECT  
PFAM : lectin_c  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1esl   (   1 )                           wsyntSteamtYdeAsayÇqqr--yth
1rdo1  ( 115 )                           kyfmssvrrmpLnrAkalÇsel--qgt
1msba  ( 107 )                        sgkkfFvtnhermpfskVkalÇsel--rgt
1tn3   (  45 )             alqtvçlkGtkvhmKçFlAftqtktFheAsedÇisr--ggt
2afp   (   1 )           qragpnÇpagWqplgdrÇiyyettamtwalAetnçmkl--ggh
1qdda  (   1 )    qaaatelpaaaasÇpegtnayrsyÇYyFnedretwvdAdlyÇqnmn-sGn
1ixxa  (   1 )                dçlsgWssyeghçYkAfekyktwedAervÇteqakgAh
1ixxb  (   1 )                dÇpsdWssyeghÇYkPfsepknwadAenfÇtqqhagGh
                                          bbbb      aaaaaaaaaa     b

                           60        70        80        90        100 
1esl   (  26 )    LVAIqnkeeieyLnsils----yspsyYWIGIrkvn----nvwvWvGtqk
1rdo1  ( 140 )    VATPrnaeeNraIqnvAk-------dvAFLGItDqrte--nvFeDl-tgn
1msba  ( 135 )    VAIPrnaeENkaIqevAk-------tsAFLGItDevte--gqFmYv-tgg
1tn3   (  84 )    LStPqtgsEndaLyeYLrqSv-gneaeIWLGLnDmaae--gtWvdm-tga
2afp   (  42 )    LAsihsqeehsfiqtl-------nagVVWigGsaçlq--agawtws-dgt
1qdda  (  50 )    LVSVltqaegafVaslIkes-gTddfnVWIGLhDp--kknrawhWs-sgs
1ixxa  (  39 )    LVsIessgeadfVAqlVtqnMkrldfyIWIglrvqgkvkqcnsews-dgs
1ixxb  (  39 )    LVsFqsseEAdfVvklAfqtf--ghsiFWMglsnv--wnqcnwqws-naa
                  b     aaaaaaaaaa           bb  bb                 

                           110       120       130       140       150 
1esl   (  68 )    pLteeAknwAp---gepnnrqkdedÇVEIyIkrekdvgmWnDerçskkkl
1rdo1  ( 180 )    rVr--ytnwne---gepnnvgsgenÇVVLlt-----ngkWnDvpçsdsfL
1msba  ( 175 )    rlt--ysnwkk---depndhgsgedÇVTIvd-----nGlWnDisçqashT
1tn3   ( 130 )    ria--yknWeteitaQpdg-gktenÇAVLSGa---anGkWfDkrçrdqlp
2afp   (  82 )    pmn--frswç---stkpddv-laaççmQmtaaad-q--çwddlpçpashK
1qdda  (  96 )    lvs--ykswg---igapssv-npgyÇVSLtsstgfq--kWkDvpçedkfS
1ixxa  (  88 )    svs--yenwi--------ea-esktÇlGLeketdFr--kwvnIyçgqqNP
1ixxb  (  84 )    mlr--ykaw----------a-eesyÇvyFkSt--nn--kwrsrAçrmmAq
                                           bbbb          bbbb      b

                          
1esl   ( 115 )    ALÇYta  
1rdo1  ( 220 )    VVçefs  
1msba  ( 215 )    AVÇefpa 
1tn3   ( 174 )    YIÇqfgiv
2afp   ( 123 )    sVÇamtf 
1qdda  ( 138 )    FVÇkFkn 
1ixxa  ( 125 )    FVÇea   
1ixxb  ( 117 )    FVÇeFqa 
                  bbbbb   


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