thymidylate synthase
|
class : alpha plus beta |
number of structures : 5 |
average size : 285 |
average PID : 46
% |
PDB
code |
start
residue |
start
chain |
end
residue |
end
chain |
name |
source |
resolution |
R-factor |
4tms
 |
1 |
- |
316 |
- |
thymidylate synthase |
Lactobacillus casei |
2.40 |
19.3 |
3tms
 |
1 |
- |
264 |
- |
thymidylate synthase |
Escherichia coli |
2.10 |
22.0 |
1tis
 |
1 |
- |
286 |
- |
thymidylate synthase |
Bacteriophage T4 |
3.10 |
19.9 |
2tsr
 |
21 |
A |
301 |
A |
thymidylate synthase |
Rattus norvegicus |
2.60 |
16.2 |
1bkp
 |
2 |
A |
279 |
A |
thymidylate synthase A |
Bacillus subtilis |
1.70 |
15.1 |
|
pir |
ali |
malform |
joy-html |
colour postscript |
postscript |
superimposed coordinates
(RasMol)
|
10 20 30 40 50
4tms ( 1 ) mlEqpYLdLAkkVldeGhfk---pdrt-------htgTySifghqMrFd
3tms ( 1 ) MkqYleLMqkVldeGtqk---ndrt-------gtgTlSifghqMrFn
1tis ( 1 ) mkqYqdlikdIfeNgyet---ddrt-------gtgtialfgskLrWd
2tsra ( 21 ) qhgElqYlrqVehImrcGfkk---edrt-------gtgTlsvfgmqArYs
1bkpa ( 2 ) tqFDkqYnsiIkdIinnGisdeefdvrtkWdsdgtpAhtlsviskqMrFd
aaaaaaaaaaaaa bbb bbbbbbbbbbbb
60 70 80 90 100
4tms ( 40 ) LskgFPLLTTkkVpfglIkSeLLWfL-hgdtnIrfLLqh-------rNhi
3tms ( 38 ) LqdgFPLVTTkrchlrsIIHELLWFL-qgdtniayLhen-------nVti
1tis ( 38 ) LtkgFPAvttkklawkaCIAELIWFL-sgstnVndLrliQhdsliqgkTv
2tsra ( 61 ) LrdeFPLLTTkrVfwkGVLeeLlWFI-kGsTnAkeLssk-------gVri
1bkpa ( 52 ) Ns-eVPILTTkkVawktAIkeLLWIWqlksndVndLnmm-------gVhi
aaaaaaaaaaa aaaa
110 120 130 140 150
4tms ( 82 ) wDewAFekwvksdeyhgpdMtdfghrsqkdpefaavYheemakFddrVlh
3tms ( 80 ) wdewAde-------------------------------------------
1tis ( 87 ) Wdenye-nqAkdlgyh----------------------------------
2tsra ( 103 ) wdanGsrdfLdslgfs----------------------------------
1bkpa ( 94 ) wdqwkqe-------------------------------------------
160 170 180 190 200
4tms ( 132 ) ddaFAakYGdLglVyGsqWrawhtsk----------gdtidqLgdvIeqI
3tms ( 87 ) -------ngdLgpVYGkQWrawptpd----------grhidqIttVlnqL
1tis ( 102 ) -------sGeLgpIYGkQWrdfg---------------gvdqIieVIdrI
2tsra ( 119 ) ----arqegDLGPVYGFQWrhfga--dYkdMdsdysgqgvdqLqkVIdtI
1bkpa ( 101 ) -------dgtIghAyGfQLgkk----nrslng-----ekvDqVdyLlhqL
aaaaaa aaaaaaaaa
210 220 230 240 250
4tms ( 172 ) kthpysrrLiVsAwnpedvptmalpPchtlYqFyVndgkLsLqLyQrsAd
3tms ( 120 ) kndpdsrrIiVsAwnvgeldkMalaPchafFqFyvadgkLsCqLyQrsCd
1tis ( 130 ) kklpndrrQiVsAwnpaelkyMAlpPchmfYqFnvrngyLdLqWyQrsVD
2tsra ( 163 ) ktnpddrrIiMcAwnpkdlplMAlpPchalCqFyvvngeLsCqLyQrsGd
1bkpa ( 135 ) knnpssrrHiTmLwnpdeldaMaltPcVyeTqWyVkhgkLhLeVrArsNd
aa bbb 333 bbbbbbbbb bbbbbbbbbbbb
260 270 280 290 300
4tms ( 222 ) IFlgVPfnIAsYALLThLVAheCglevgeFiHtFGdAhLyvnHldqIkeQ
3tms ( 170 ) VFlgLPfnIASYALLVhMMAqQCdlevgdFvWtGGdThLysnHmdqThlQ
1tis ( 180 ) VflgLpfnIAsYAtLVhiVAkMCnlipGdLiFsGGnThIymnhveqckei
2tsra ( 213 ) MglgVpfnIASYALLTyMIAhITglqpGdFvHtLGdAhIylnhiepLkiQ
1bkpa ( 185 ) MAlgNPfnVFQYNVLQrMIAqVTgyelgeYiFnIgdChVytrHidnLkiQ
aaaaaaaaaaaaaaaaaaa bbbbbbbbbbbbbbb333aaaaaaa
310 320 330 340 350
4tms ( 272 ) lsrtprpaPtLqLnpdkh------------dIfdFdmkdIkllnydPypa
3tms ( 220 ) lsreprplPkLiikrkPe------------sIfdYrfeDFeiegydPhpg
1tis ( 230 ) lrrepkelCelvisglpykFrylsTkeQLkyVlklrpkdFvLnnyvshpp
2tsra ( 263 ) lqreprpFPkLrilrkVe------------tIddFkveDFqiegynphpt
1bkpa ( 235 ) mereqfeAPeLwinpevk------------dFydFtiddFkLinYkhgdk
bbbb 333 333bbbb
4tms ( 310 ) ikApvAv
3tms ( 258 ) ikApvai
1tis ( 280 ) ikgkmav
2tsra ( 301 ) i
1bkpa ( 273 ) llFevAv