Ribosome inactivating protein
|
class : alpha plus beta |
number of structures : 7 |
average size : 254 |
average PID : 38
% |
PDB
code |
start
residue |
start
chain |
end
residue |
end
chain |
name |
source |
resolution |
R-factor |
1apa
 |
6 |
- |
266 |
- |
antiviral protein alpha |
Phytolacca americana |
2.30 |
17.2 |
1qci
 |
1 |
A |
262 |
A |
antiviral protein C |
Phytolacca americana |
2.00 |
23 |
1abr
 |
1 |
A |
251 |
A |
abrin-A |
Abrus precatorius |
2.14 |
18.9 |
1fmp
 |
1 |
- |
267 |
- |
ricin |
Ricinus communis |
2.80 |
20.90 |
1mrj
 |
1 |
- |
247 |
- |
alpha-trichosanthin |
Cucurbitaceae trichosanthes |
1.60 |
17.3 |
1mrg
 |
1 |
- |
246 |
- |
momordin I |
Momordica charantia |
1.8 |
19.5 |
1cf5
 |
1 |
A |
249 |
A |
rmomordin II |
Momordica balsamina |
2.55 |
17.2 |
|
pir |
ali |
malform |
joy-html |
colour postscript |
postscript |
superimposed coordinates
(RasMol)
|
10 20 30 40 50
1apa ( 6 ) intitFdVGnAtinkYatFMksIhnqAkdptlkÇygIpMLPntnl
1qcia ( 1 ) vntiiYnVgsTtiskYatFLndLrneAkdpslkÇYgIpMLPntnt
1abra ( 1 ) edrpikFstegAtsqsYkqFIeaLrerLr-g-glihdipVLpdptt
1fmp ( 1 ) ifpkqYpiinFtTAgAtvqsYtnFIraVrgrLttgadvRheIpVLpnrvg
1mrj ( 1 ) dvsFrLsgAtsssYgvFIsnLrkaLp-nerklydipLLrs--s
1mrg ( 1 ) dvsFrLsgAdprsYgmFIkdLrnaLp-frekVynIplLlp--s
1cf5a ( 1 ) dVnFdLstAtaktYtkFIedFratLp-fshkVydipLLys--t
bbbb aaaaaaaaaaaaaa bb bb
60 70 80 90 100
1apa ( 51 ) t---pkyLlVtLqdsslktItLMLkRnnLyVMGYaDtyn-gkçRyHIFkd
1qcia ( 46 ) n---pkyVlVeLqGsnkktItLMLrRnnLyVMGYSDpfetnkçRyHIFnd
1abra ( 45 ) lqernrYItVeLsNsdtesIeVGIDVtnAyVVAYrAg-----tqSyfLrd
1fmp ( 51 ) lpinqrFIlVeLsNhaelsVtLALDVTnAyVvGYrAg-----nSAYFFhp
1mrj ( 41 ) LpGsqrYalIhLTNyadetIsVAIdVTnVyIMGYrAg-----dTSYFFne
1mrg ( 41 ) vsgagrYllMhLfnrdgktItVAVDVTnIyIMGYlAd-----ttSYFFne
1cf5a ( 41 ) isdsrrFilLNLTSyayetIsVAIDVtnVyVVAYrTr-----dvSyFFke
bbbbbbb bbbbbbb bbbbbb bbbb
110 120 130 140 150
1apa ( 97 ) isntterndVmttLÇpnpssrvgknInYdssypaLekkVgr-pRsqVqLG
1qcia ( 93 ) Isg-terqdVettLÇpnansrvsknInFdsryptLeskAgvksRsqvqLG
1abra ( 90 ) -----ApssAsdyLFt--gT-dqhsLpFyGtygdLerwAhq-srqqIpLG
1fmp ( 96 ) d--nqedaeAIthLFt--dVqnrytfafGGnYdrLeqlAgn-lrenIeLG
1mrj ( 86 ) ----asAteAAkyvFk--dAmrkvtLpYsGnyerLqtaAgk-irenIpLG
1mrg ( 86 ) ----paAelASqyvFr--darrkitLpYsGdyerLqiaAgk-pRekipIG
1cf5a ( 86 ) -----sppeAynilfk--gt-rkitLpYtgnyenLqtaAhk-iRenidLG
aaaaaaa bbbb aaaaaaaa 333
160 170 180 190 200
1apa ( 146 ) iqiLnsgIgkIygvd--sftektEAeFLLVAiQMVSEAARFkyIEnqVkt
1qcia ( 142 ) iqiLdsnIgkISgvm--sftektEAeFLLVAiQMVSEAARFkyIEnqVkt
1abra ( 131 ) lqaLthGIsfFrsg---gndneeKArTLIVIiQMVAEAARFryISnrVrv
1fmp ( 141 ) ngPLeeAIsaLyyyStggtqlptLArSFIiCIQMISEAARFqyIEgeMrt
1mrj ( 129 ) LpaLdsAIttLfyy-----nansAAsaLMvLIQSTSEAARYkfIeqqIgk
1mrg ( 129 ) LpaLdsAIstLlhy-----dstaAAgaLLVLIQTTAEAARFkyIEqqIqe
1cf5a ( 127 ) LpaLSsAIttLfyy-----naqsAPsaLLvLiQTTAEAArFkyIErhVak
aaaaaaaaaaa aaaaaaaaaaaaaa aaaaa aaaaaaaaa
210 220 230 240 250
1apa ( 194 ) nF--nrafyPnakVlnLEeSWgkIStaIHnAk--ngaLtspleLknangs
1qcia ( 190 ) nf--nrafnPnpkVlnLQetWgkIStaIHdAk--ngvLpkpleLvdasga
1abra ( 178 ) SIqtgtafqPdaaMislEnnWdnLSrgVQeSv--qdtFpnqVtLtnirne
1fmp ( 191 ) RirynrrsaPdpSVitlEnSWgrLStaIQeSn--qgAFaspiqLqrrngs
1mrj ( 174 ) rv--dktflPslaIislEnswsaLSkqIQiAstnngqFespvvLinaqnq
1mrg ( 174 ) RA--yrdevPslATisLEnswsgLSkQIqlAqgnnGiFrtpivLvdnkgn
1cf5a ( 172 ) yv--atnfkPnlaIisLEnqWsaLSKQIflAqnqggkFrnpVdLikptgq
aaaaaaaaaaaaaaaaaaa bbbbbbbbb
260 270 280
1apa ( 240 ) kwiVlrvd--dIepdVgLLkyvng--tçqat
1qcia ( 236 ) kwiVlrvd--eIkpdVaLLnyvgg--sçqtt
1abra ( 226 ) pviVdslshptva-vLaLMlfvcnpp----n
1fmp ( 239 ) kfsVydvs--iLipiIaLMvyrcapppssqf
1mrj ( 222 ) rvtitnvdagvVtsnIaLLlnrnnma
1mrg ( 222 ) rvqitnvtskVVtsnIqLLlntrni
1cf5a ( 220 ) rfqVtnvdsdvVkgnIkLLLNsraSta-den
bbbbbb aa