tRNA synthetases class II (G, H, P and S)
|
class : alpha plus beta |
number of structures : 5 |
average size : 307 |
average PID : 19
% |
PDB
code |
start
residue |
start
chain |
end
residue |
end
chain |
name |
source |
resolution |
R-factor |
1kmm
 |
4 |
A |
325 |
A |
histidyl-tRNA synthetase |
Escherichia coli |
2.6 |
22.1 |
1adj
 |
2 |
A |
325 |
A |
histidyl-tRNA synthetase |
Thermus aquaticus |
2.7 |
21.7 |
1sry
 |
111 |
A |
421 |
A |
seryl-tRNA synthetase |
Thermus aquaticus |
2.5 |
18.4 |
1qf6
 |
241 |
A |
531 |
A |
threonyl-tRNA synthetase |
Escherichia coli |
2.90 |
19.5 |
1ati
 |
1 |
A |
394 |
A |
glycyl-tRNA synthetase |
Thermus aquaticus |
2.75 |
22.7 |
|
pir |
ali |
malform |
joy-html |
colour postscript |
postscript |
superimposed coordinates
(RasMol)
|
10 20 30 40 50
1kmma ( 4 ) ni-qair
1adja ( 2 ) ta-ravr
1srya ( 111 ) vggeeanreikrvggppefsfppl---dhvaLMekNgWweprisqvsg-s
1qf6a ( 241 ) kr---dHrkIGkqldlYhmq--e-ea-p
1atia ( 1 ) aAssldeLvalCkrrgfIfqsseiygGlq
60 70 80 90 100
1kmma ( 10 ) gmndylpgetaiwqrIegtLknvLg-syg-YseirLpiveqTplFkrAIg
1adja ( 8 ) GtkdlfgkelrmhqrIvatArkvLe-aag-AlelvTpifeetqvFekGVg
1srya ( 157 ) rsyaLkgdLalYelaLlrFAmdfMa-rrg-FlpmtLpsyarekaFlGTGh
1qf6a ( 262 ) GmVfwhndGwtiFreLevfVrsklk-eyq-YqevkgpfmmdrvlWekTgh
1atia ( 30 ) GvydygplGvelknnLkqaWwrrNvyerddMegldasvlthrlvLhySgh
aaaaaaaaaaaaaaaaaaa bb bbb aaaaaa
110 120 130 140 150
1kmma ( 58 ) evtd----VVeke-------Mytfedr-----ngdslTlrPEgtAgCVrA
1adja ( 56 ) aaTd----ivrke-------Mftfqdr-----ggrslTlRPeGtAAMVrA
1srya ( 205 ) Fpay------rdq-------Vwaia--------etdlylTgtAeVvLNal
1qf6a ( 310 ) wdny------kda-------Mfttsse------nreyCiKPmNcPgHVqi
1atia ( 80 ) eatfadpmvdnwtppryfnMMfqdlrgprggrgl-LaylRPeTAQgIFvn
bbb bbbb aaaaaa
160 170 180 190 200
1kmma ( 92 ) gieh----g--lLy-nqeqrlwYigpMfrher-------pqkGryrqfhq
1adja ( 90 ) Yleh----g--MkvwpqpvrLWMagpMfraer-------pqkgryrqfhq
1srya ( 234 ) hsge----ilp--yeaLplryAGyApAfrseagsfgkdVrGLMrVhqfhk
1qf6a ( 341 ) Fnqg----lks--yrdLplrMAEFGsChrnep-s--gslhGLMrVrgftq
1atia ( 197 ) Fknvldatsrk-----lgFGIAQigkAfrnEitPr----nFIFrvrefeq
a bbbbbbbbbb bbbb
210 220 230 240 250
1kmma ( 128 ) LGCEVFglq----gpdIDAeLImLTarWWraLgI-sehVtLeLNSIGsle
1adja ( 127 ) VNYEALgse----npiLDAeAVvlLyeCLkelgL-r-rLkVkLSSVGdpe
1srya ( 278 ) VEQYVLTeasleASdraFqeLleNAeeILrlLeL---pYrlveVat----
1qf6a ( 382 ) DdAHIFCt--eeqIrdeVngCIrLVydMYstfgF--ekivVkLStrpe--
1atia ( 238 ) MEIEYFVr--pgeDeywhryWveeRlkWWqemgLsrenLvpyqqpp----
bbbbbb aaaaaaaaaaaaaaaaa bbbb
260 270 280 290 300
1kmma ( 173 ) Aranyrdalvafleqh----------------------------------
1adja ( 171 ) drarYnayLrevLsphreaLsedSkerLeenPMRIldSkserDqallkel
1srya ( 321 ) --------------------------------------------------
1qf6a ( 426 ) --------------------------------------------------
1atia ( 282 ) --------------------------------------------------
310 320 330 340 350
1kmma ( 224 ) ---algdyldeeSrehfagLcklLesagiaytvnqrlvrgldyynrTVFe
1adja ( 221 ) gVrpMldfLgeeArahLkeVerhLerlsVpyelepalvrgldYYvrTAFe
1srya ( 321 ) -----------------------------------gdm--gpGk-wrqVd
1qf6a ( 426 ) -krigs---demWdrAeadLavALeennipfeyqlgeG--aFyG--PkIe
1atia ( 282 ) -----------------------------------ess--ahyA-katvd
bbbb
360 370 380 390 400
1kmma ( 271 ) WvTn--slgsqgtVCaGGRYd-gLVeqLg---------------------
1adja ( 271 ) VhHe--eigaqsaLgGGGRYD-gLSellg---------------------
1srya ( 333 ) IeVyLPsegryreTHsCSALldwQArrAn---------------------
1qf6a ( 468 ) FtLyDcl-drawqCGtVqLDf-sLPsrLs---------------------
1atia ( 294 ) IlYrFph--gsleLEgIaQrtDFDLGShTkdqeaLgItarvlrNehstqr
bb bbbbbbb aaaa
410 420 430 440 450
1kmma ( 297 ) gr----------atpAVGFaMg--LErLVlLVqavnpefka
1adja ( 297 ) gp----------rVpGVGFaFg--VerValALeaEgfgLpe
1srya ( 362 ) LrYr-DpegrvryAyTLnNtALaT-PrILAMLLENHQlqdG-----rVrV
1qf6a ( 495 ) AsYv-gednerkvPVMIHRaILgsMErFIGIltEefag
1atia ( 342 ) LAyrdpetgkwfVPyVIePsAg--VdrGVLAlLAeAFtreelpngeeriv
bbbbbbb aaaaaaaaaaa
460
1kmma
1adja
1srya ( 405 ) PqaLipyMgkevLepcg
1qf6a
1atia ( 390 ) lklkp