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Align your sequence(s)

Anticodon binding domain

class : alpha beta number of structures : 6 average size : 104 average PID : 22 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1evl rasmol 533 A 642 A threonyl-tRNA synthetase Escherichia coli 1.55 21.5
1hc7 rasmol 281 A 395 A prolyl-tRNA synthetase Thermus thermophilus 2.43 20.6
1ati rasmol 395 A 505 A glycyl-tRNA synthetase Thermus aquaticus 2.75 22.7
1h4v rasmol 325 B 421 B histidyl-tRNA synthetase Thermus aquaticus 2.4 20.8
1kmm rasmol 326 A 424 A histidyl-tRNA synthetase Escherichia coli 2.6 22.1
1qe0 rasmol 326 A 420 A histidyl-tRNA synthetase Staphylococcus aureus 2.7 19.7
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
PFAM : HGTP_anticodon  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1evla  ( 533 )    fpTwlApvQVVIMNit-----dsQseyVneltqkLsna--gIrVkadlrn
1hc7a  ( 281 )    lpPrlApiqVVIVPiykdesrerVleaAqgLrqaLlaq--glrVhLDdrd
1atia  ( 395 )       qlapikVAVIPlvkn--rpeIteyAkrLkarLlal-glgrVlyEd-t
1h4vb  ( 325 )       eekgPdLYLIPlt-----eeAvaeAfyLAeaLrp---rLrAeyAlap
1kmma  ( 326 )        dpvVdIYLVAsg-----adTqsaAmaLAerLrdeLpgvkLmTNhgg
1qe0a  ( 326 )       ieenldLFIVTmg-----dqAdryAvkLLnhLrhn--gIkAdKDylq
                           bbbbb         aaaaaaaaaaaaa       bbb    

                           60        70        80        90        100 
1evla  ( 576 )    -ekigfKirehtlrrVPYMLvCgdkeves---------gkVaVrTrrgkd
1hc7a  ( 329 )    qhtpgyKfhewelkgVPfrVeLgpkdle---------ggqAvLAsrl-gg
1atia  ( 438 )    -gnigkAyrrHdevgTpFAVTVdydTigqSkdgttrlkdtVtVRdrdtme
1h4vb  ( 364 )    -rkpakGleeAlkrgAaFAGfLgedElr---------ageVtLkrLatge
1kmma  ( 367 )    -gnfkkQfarAdkwgArVAVvLgeseva---------ngtAvVkdlrsge
1qe0a  ( 366 )    -rkikgQmkqAdrlgAkfTIvIgdqele---------nnkIdVknmttge
                     aaaaaaaaaa    bbbbb aaaaa           bbbbbb     

                           110       120     
1evla  ( 616 )    lgsmdvneViekLqqeirsrslkQlee
1hc7a  ( 369 )    ketlplaaLpeaLpgkLdaFheelyrr
1atia  ( 487 )    qirlhVdeLegfLrerLrw        
1h4vb  ( 404 )    qvrlsreeVpgyLlqal-g        
1kmma  ( 407 )    qtavaqdsVaahLrtll-g        
1qe0a  ( 406 )    setieLdaLveyfkk            
                  bbbbb   aaaaaaaa           


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