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Align your sequence(s)

immunoglobulin domain -- V set - variable non immunoglobulin

class : all beta number of structures : 9 average size : 108 average PID : 18 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1tvd rasmol 1 B 116 B T-cell receptor delta chain Homo sapiens 1.90 16.1
1b88 rasmol 1 A 114 A T-cell receptor V-alpha domain Mus musculus 2.50 22.4
1cd8 rasmol 1 - 114 - T-cell surface glycoprotein CD8 alpha chain Homo sapiens 2.6 19.2
3cd4 rasmol 1 - 97 - T-cell surface glycoprotein CD4 domain 1 Homo sapiens 2.2 19.7
1neu rasmol 1 - 119 - myelin P0 protein Rattus norvegicus 1.9 21.5
1hnf rasmol 4 - 104 - T-cell surface antigen CD2 Homo sapiens 2.5 19.3
1hng rasmol 2 A 99 A T-cell surface antigen CD2 Rattus norvegicus 2.8 21.5
1cid rasmol 1 - 105 - T-cell surface glycoprotein CD4 domain 3 Rattus norvegicus 2.8 23.3
1qfp rasmol 1 A 119 A sialoadhesin Mus musculus 2.80 19.8
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
SMART : IGv  
PFAM : ig  
other info key to JOY annotation | show related PDB structures

                           10        20        30        40        50  
1tvdb  (   1 )     dkVtQsSpdqtvasgseVvLt-YdTv-----ysnpdLfWyRirp--d
1b88a  (   1 )    mqqVrQspqsltvwegetAiLnÇs-Yens------aFdyFPWyqqfp--g
1cd8   (   1 )     sqFrVspldrtWnlgetVeLkÇq-VlLs-----nptsgCsWlfqprgaa
3cd4   (   1 )           kkvvlgkkgdtveLtÇt-As--qkks----iqFhWkNs-----
1neu   (   1 )     ivVy-TdrevygavgsqvtLs-fwssewvsd--dIsFtWrYqpegg-
1hnf   (   4 )        t-naletwgalgqdinLdIpsFqms-----ddIddIkWek----t-
1hnga  (   2 )          dsgtvwgalghginLnIpnfqmt-----ddideVrWer----g-
1cid1  (   1 )          tsitayksegesAeFsFp-lnlg-----eeslqGeLrWkaekap
1qfpa  (   1 )    twgVs-SpknvqglsgscllIi-FsypadvpvsngItAIWyydys---
                            bb      bbb                  bbbbb      

                           60        70        80        90        100 
1tvdb  (  42 )    ysfqfVfyGd-ds-rseg-a----dfTqgrFsVkhi---ltqkAFhLvIs
1b88a  (  42 )    egpallisIl-sv-snkk-e----d---grftIfFn---krekkLsLhIa
1cd8   (  44 )    asptfLLyLs-qn-kpka-ae---gldtqrfsGkrl-----gdtFVLtLs
3cd4   (  32 )    -nqikILGNq-gs-flt--k--gpskLndrAdSr--rslWdqGnFPLiIk
1neu   (  45 )    rdaisIFhya-kg-qpyi-de--vgtFkerIqwv--G-dpswkdGsIVIh
1hnf   (  39 )    sdkkkIAqfr-keketfk-ek-------dtYkLf--k------nGTLkIk
1hnga  (  36 )    --stlVAefk-rkmkpfl-ks-------gaFeIl--a------nGdLkIk
1cid1  (  39 )    ssqswItFsLk-nqkVsvq--kstsnP--kFqLse------tlpLtLqIp
1qfpa  (  46 )    gkrqvVihs------gd--pklvdkrFrgrAelm--G-nmdhknLlLk
                      bbbbb       b             bbb             bbb 

                           110       120       130     
1tvdb  (  77 )    pVrteDsatYyÇAFtlpp-ptdklifG-kGTrVtVep
1b88a  (  79 )    dSqpgdsAtYfÇAASasfgdnskliwG-lGTsLvVnp
1cd8   (  83 )    dFrreNeGyYsAlsn----simyfS-hfVpVflpa
3cd4   (  73 )    nLkieDsdtYiÇeVe--------dqke--eVqLlV  
1neu   (  87 )    nLdysDnGtFtÇdVkn      vGkts--qVtLyVfe
1hnf   (  72 )    hLktddqdiYkVsIydtkg---knvle-kiFdLkIqe
1hnga  (  67 )    nLtrddsgtYnVtVystng---triln-kaldLrIle
1cid1  (  78 )    qVslqfagsgnLtLtlDr----gilyq--eVnLv   
1qfpa  (  85 )    dLkpeDsgtYnFrFeIsds---nrwldvkGTtVtVtt
                     333 bbbbbbbb        bbb    bbbb   


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