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Align your sequence(s)

ubiquitin conjugating enzyme

class : alpha plus beta number of structures : 13 average size : 149 average PID : 34 %

PDB
code
start
residue
start
chain
end
residue
end
chain
name source resolution R-factor
1jat rasmol 2 B 137 B ubiquitin-conjugating enzyme variant MMS2 Saccharomyces cerevisiae 1.60 20.30
1j7d rasmol 6 A 145 A MMS2 Homo sapiens 1.85 21.50
1j7d rasmol 2 B 150 B ubiquitin-conjugating enzyme E2-17 kDa Homo sapiens 1.85 21.50
1jat rasmol 1 A 152 A ubiquitin-conjugating enzyme E2-17.5 kDa Saccharomyces cerevisiae 1.60 20.30
1qcq rasmol 1 A 148 A ubiquitin conjugating enzyme Saccharomyces cerevisiae 2.70 24.00
1fzy rasmol 2 A 150 A ubiquitin-conjugating enzyme E2-24 kDa Saccharomyces cerevisiae 1.90 20.90
2ucz rasmol 2 - 165 - ubiquitin conjugating enzyme Saccharomyces cerevisiae 2.93 22.70
1u9b rasmol 0 - 158 - ubiquitin-conjugating enzyme E9 Mus musculus 2.00 18.50
2e2c rasmol 22 - 177 - ubiquitin conjugating enzyme Spisula solidissima 2.00 21.60
1i7k rasmol 30 A 175 A ubiquitin-conjugating enzyme E2 H10 Homo sapiens 1.95 17.60
2aak rasmol 1 - 150 - ubiquitin conjugating enzyme Arabidopsis thaliana 2.40 22.10
1ayz rasmol 2 A 154 A ubiquitin-conjugating enzyme rad6 Saccharomyces cerevisiae 2.60 21.30
1c4z rasmol 4 D 147 D ubiquitin conjugating enzyme E2 Homo sapiens 2.60 23.70
pir | ali | malform | joy-html | colour postscript | postscript | superimposed coordinates (RasMol)

external links
SMART : UBCc  
PFAM : UQ_con  
other info key to JOY annotation | show related PDB structures
alignment show WITH Pfam family sequences

                           10        20        30        40        50  
1jatb  (   2 )         skvprnfrLleElekgek----esCsygladsddi--tmtkWnGt
1j7da  (   6 )        gvkvprnfrLleEleeGqkgvgdgtVsWgleddedm--tltrWtGm
1j7db  (   2 )          a-glprrIikEtqrLlaepv-pgIkaepd-e----snaryFhVv
1jata  (   1 )          aaslpkrIiketekLvsdpV-pgItAeph-d----dnlryFqVt
1qcqa  (   1 )           mssskrIakelsdlerdpp-tscsAgpvgd-----dlyhWqAs
1fzya  (   2 )            srakrImkEiqaVkddpa-ahItLefvse----sdihhLkGt
2ucz   (   2 )          sktAqkrLlkelqqlikdsp-pgIvAgpkse----nnIfiWdCl
1u9b   (   0 )        nmsgiAlsrLaqerkawrkdhp-fgFvAvPtknpdgtmnlmnWeCa
2e2c   (  22 )    mttskerhsvskrLqqelrtLlmsgd-pgItAfpdg-----dnlfkWvAt
1i7ka  (  30 )            pvgkrLqqelmtLmmsgd-kgIsAfpes-----dnlfkWvGt
2aak   (   1 )         mstpArkrLmrDfkrLqqdpp-agIsGapq-d----nnimlWnAv
1ayza  (   2 )          stpArrrLmrDfkrMkedap-pgVsAsPl-p----dnvmvWnAm
1c4zd  (   4 )              srrLmkeleeirkcgm-knFrniqvde----anlltwqGl
                           aaaaaaaaaaaaa       bbbbb           bbbbb

                           60        70        80        90        100 
1jatb  (  45 )    IlGPphSnHenriYsLsIdCgpnYPdspPkVtFiskInLpcVnpttGeVq
1j7da  (  50 )    IiGPprTnYenriYsLkVeCgpkYpeapPsVrFvtkInMngInnssGmVd
1j7db  (  39 )    IaGPqdSpFegGtFkLeLfLpeeYpmaaPkVrFmtkIyHPNVdk-lgrIc
1jata  (  39 )    IeGpeqSpYedGiFeLeLyLpddYpmeaPkVrFltkIyHPNIdr-lgrIc
1qcqa  (  38 )    ImGpadSpYagGvFfLsIhFptdYPfkpPkIsFttkIyHPNIna-ngnIc
1fzya  (  39 )    FlGPpgtpYegGkFvVdIeVpmeYpfkpPkMqFdtkVyHPNIssvtgaIc
2ucz   (  41 )    IqGppdtpYadgvfnAkLeFpkdYplspPkLtFtpsilHPNIyp-nGeVc
1u9b   (  45 )    IpGkkgtpWegGlFkLrMlFkddYpsSpPkCkFeppLfHPNVyp-sGtVc
2e2c   (  66 )    LdGpkdtvYesLkYkLtLeFpsdYPykpPvVkFttpCwHPNVdq-sgnIc
1i7ka  (  66 )    IhGaagtvYedlrYkLsLeFpsgYpynaPtVkFltpCyHPNVdt-qgnIs
2aak   (  40 )    IfGpddtpWdgGtFkLsLqFsedYpnkpPtVrFvsrMFHPNIya-dgsIc
1ayza  (  40 )    IiGpadtpYedGtFrLlLeFdeeYpnkpPhVkFlSeMFHPnVya-ngeIc
1c4zd  (  39 )    IvP-dnppYdkgaFrIeInFpaeYpfkpPkItFktkIyHPNIde-kgqVc
                  bb          bbbbbbb          bbbb                 

                           110       120       130       140       150 
1jatb  (  95 )    t-dFhTlr--------------dWkraytMetLLldLrkeMat-------
1j7da  ( 100 )    arsIpvLa--------------kWqnsysIkvVLqeLrrlMms-------
1j7db  (  88 )    ---ldilk-d------------kWspalqIrtVLlsIqalLsapnpddpl
1jata  (  88 )    ---ldvlk-t------------nWspalqIrtVLlsIqalLaspnpndpl
1qcqa  (  87 )    ---ldilk-d------------qWspaltLskVLlsIcslLtdAnpddpl
1fzya  (  89 )    ---ldilk-n------------aWspvitLksALisLqaLLqspepndpq
2ucz   (  90 )    ---isiLhspgddpnmyelaeerWspvqsVekILlsVmsMLsePniesgA
1u9b   (  94 )    ---lsiLeed-----------kdWrpaitIkqILlgIqelLnePniqdpA
2e2c   ( 115 )    ---ldilk-e------------nWtasydVrtILlsLqslLGePnnaspl
1i7ka  ( 115 )    ---ldiLk-e------------kWsalydVrtILlsIqslLgePnidspl
2aak   (  89 )    ---ldiLq-n------------qWspiydVaaILtsIqslLcdPnpnspA
1ayza  (  89 )    ---ldiLq-n------------rWtptydVAsILtsIqslFndpnpaspA
1c4zd  (  87 )    ---LpvIsae------------nwkpatkTdqViqsLialVndPqpehpl
                      333                      aaaaaaaaaaaa         

                           160       170       180  
1jatb  ( 123 )    ------------pankklrQpke-----getf  
1j7da  ( 129 )    ------------keNmklpQppe-----gqtYnn
1j7db  ( 122 )    AndvAeqWktneaqAietArawTrlyAmn     
1jata  ( 122 )    AndvaedWikneqgAkakArewTklyAkkkp   
1qcqa  ( 121 )    vpeiahiyktdrpkYeatArewtkkyA--v    
1fzya  ( 123 )    daevaqhylrdresFnktAalwTrlyA--s    
2ucz   ( 137 )    nidAcilwrdnrpeFerqVklsilkslg-----f
1u9b   ( 130 )    qaeAytiycqnrveYekrVraqAkkfap-----s
2e2c   ( 149 )    naqAAdmws-nqteYkkvLhekyktaq--sd--k
1i7ka  ( 149 )    nthAaelwk-nptaFkkyLqetyskqv--t    
2aak   ( 123 )    nseAarmyseskreYnrrVrdVVeqSw--t    
1ayza  ( 123 )    nveAatlfkdhksqYvkrVkeTVekSw--eddmd
1c4zd  ( 122 )    radlaeeyskdrkkFcknAeefTkky        
                     aaaa    aaaaaaaaaaaaa          


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